RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TRMOQ9BU70 441 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 CXorf56Q9H5V9 222 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 REEP4Q9H6H4 257 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 PLSCR4Q9NRQ2 329 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 UBQLN4Q9NRR5 601 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 ACSS1Q9NUB1 689 aaPredicted RBP6.43□□□□□ -1.38
USP46-208ENST00000512656 FLRT3Q9NZU0 649 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SH3BP4Q9P0V3 963 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 NTMQ9P121 344 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 VDAC3Q9Y277 283 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 TMED5Q9Y3A6 229 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 SNX8Q9Y5X2 465 aa6.43□□□□□ -1.38
USP46-208ENST00000512656 GJE1A6NN92 205 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 TMEM114B3SHH9 223 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 H3BNH8 94 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 SCDO00767 359 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 COPEO14579 308 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 AZIN1O14977 448 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 ADAMDEC1O15204 470 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 AKAP10O43572 662 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 GMFGO60234 142 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 PLIN3O60664 434 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 AQP8O94778 261 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 OXSR1O95747 527 aaPredicted RBP6.42□□□□□ -1.38
USP46-208ENST00000512656 LY6G6DO95868 133 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 IGKV1D-16P01601 117 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 TUBBP07437 444 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 KRT16P08779 473 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 ALOX5P09917 674 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 ATP6V1C1P21283 382 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 CCKARP32238 428 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 HPCAL1P37235 193 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 RPL3P39023 403 aaKnown RBP6.42□□□□□ -1.38
USP46-208ENST00000512656 MAP3K8P41279 467 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 PRIM2P49643 509 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 CARD18P57730 90 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 POU6F2P78424 691 aaPredicted RBP6.42□□□□□ -1.38
USP46-208ENST00000512656 KIAA0040Q15053 153 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 LIPMQ5VYY2 423 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 HBMQ6B0K9 141 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 LRIG3Q6UXM1 1119 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 APOOLQ6UXV4 268 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 RNF165Q6ZSG1 346 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 SH2D5Q6ZV89 423 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 GGNQ86UU5 652 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 TRABD2AQ86V40 505 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 ZNF527Q8NB42 609 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 STEAP2Q8NFT2 490 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 OR4C3Q8NH37 302 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 OR2V1Q8NHB1 315 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 KIF18AQ8NI77 898 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 FAM110BQ8TC76 370 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 MZB1Q8WU39 189 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 PIK3R3Q92569 461 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 JADE3Q92613 823 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 HOXB13Q92826 284 aaPredicted RBP6.42□□□□□ -1.38
USP46-208ENST00000512656 ARL8AQ96BM9 186 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 MTERF3Q96E29 417 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 PERPQ96FX8 193 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 MARK4Q96L34 752 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 MS4A4EQ96PG1 132 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 HDHD5Q9BXW7 423 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 RTN4RQ9BZR6 473 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 HOXD1Q9GZZ0 328 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 OR10A4Q9H209 315 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 NGBQ9NPG2 151 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 OXSMQ9NWU1 459 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 EMCNQ9ULC0 261 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 GPR52Q9Y2T5 361 aa6.42□□□□□ -1.38
USP46-208ENST00000512656 SONP18583 2426 aaKnown RBP6.42□□□□□ -1.38
USP46-208ENST00000512656 USF3Q68DE3 2245 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 A0A1W2PPM1 405 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 A0A1W2PQD3 144 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 A0A1W2PRB8 838 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 SMAD7O15105 426 aaKnown RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 KLF4O43474 513 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 CXCL13O43927 109 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 KCNK2O95069 426 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 FAM153BP0C7A2 387 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 ACP2P11117 423 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 PAX1P15863 534 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 SDC1P18827 310 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 PSMB1P20618 241 aaKnown RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 ELK4P28324 431 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 FRKP42685 505 aaPredicted RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 SLC6A8P48029 635 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 PTH2RP49190 550 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 RPL38P63173 70 aaKnown RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 SRSF3P84103 164 aaKnown RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 PPP2R2BQ00005 443 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 SLC18A2Q05940 514 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 PDE7AQ13946 482 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 MLC1Q15049 377 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 RNPS1Q15287 305 aaKnown RBP6.41□□□□□ -1.38
USP46-208ENST00000512656 PLPPR5Q32ZL2 321 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 FAM153CQ494X1 144 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 CLEC6AQ6EIG7 209 aa6.41□□□□□ -1.38
USP46-208ENST00000512656 ANKRD26P1Q6NSI1 321 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms