RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FGF13Q92913 245 aa8.4□□□□□ -1.07
VCAN-208ENST00000512590 TOR3AQ9H497 397 aa8.4□□□□□ -1.07
VCAN-208ENST00000512590 KCNIP2Q9NS61 270 aa8.4□□□□□ -1.07
VCAN-208ENST00000512590 TAAR2Q9P1P5 351 aa8.4□□□□□ -1.07
VCAN-208ENST00000512590 ADCY10Q96PN6 1610 aa8.4□□□□□ -1.07
VCAN-208ENST00000512590 NCOA3Q9Y6Q9 1424 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TRBV23-1A0A0A0MS06 115 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 M0QX08 132 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 SERPINA6P08185 405 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ALDH3B2P48448 385 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PGGT1BP53609 377 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 MOGSQ13724 837 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ZNF460Q14592 562 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 REEP3Q6NUK4 255 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TMEM205Q6UW68 189 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PTRH1Q86Y79 214 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 ABHD4Q8TB40 342 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 FCGR1BQ92637 280 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 SMOQ99835 787 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 GHITMQ9H3K2 345 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 CPNE7Q9UBL6 633 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TRBV2A0A0J9YWF9 115 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 OR1D4P47884 311 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PTP4A2Q12974 167 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TCTN1Q2MV58 587 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PAQR3Q6TCH7 311 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 LRRC57Q8N9N7 239 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 OR2M3Q8NG83 312 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 CENPOQ9BU64 300 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 WDR55Q9H6Y2 383 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 CCM2LQ9NUG4 571 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 ENPP5Q9UJA9 477 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 NEXMIFQ5QGS0 1516 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 CCDC187A0A096LP49 1063 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 OR6C70A6NIJ9 312 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ZNF705EA8MWA4 302 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 GPR39O43194 453 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PIAS2O75928 621 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 HLA-DQB2P05538 268 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ETFAP13804 333 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 DRD2P14416 443 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 HTN1P15515 57 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 HOXA11P31270 313 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 RPL7AP62424 266 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 BST1Q10588 318 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 UGT3A2Q3SY77 523 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ZNF813Q6ZN06 617 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 FAM43BQ6ZT52 329 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PM20D2Q8IYS1 436 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 GCNT2Q8N0V5 402 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 OR5AS1Q8N127 324 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 APH1BQ8WW43 257 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 SCAMP4Q969E2 229 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ANKRD9Q96BM1 317 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 KCNJ15Q99712 375 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PLCXD1Q9NUJ7 323 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 RHCGQ9UBD6 479 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 A0A1W2PPK0 400 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 F5H0A9 414 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 NDUFB3O43676 98 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 GFRA3O60609 400 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 NELFEP18615 380 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 SRP9P49458 86 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 GBE1Q04446 702 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 CLVS2Q5SYC1 327 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 FAM57BQ71RH2 274 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 SLC15A4Q8N697 577 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 OR4D10Q8NGI6 311 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 SLC35C1Q96A29 364 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 MRPS24Q96EL2 167 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 KIF25Q9UIL4 384 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TK1P04183 234 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 BPGMP07738 259 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 PRKCIP41743 596 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 MNX1P50219 401 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 PPP1CAP62136 330 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 KLF1Q13351 362 aaPredicted RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 GUCA2BQ16661 112 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 SFT2D3Q587I9 215 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 RNLSQ5VYX0 342 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 DHRS13Q6UX07 377 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 B3GLCTQ6Y288 498 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 NLRP8Q86W28 1048 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 KLHDC8AQ8IYD2 350 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 ATXN2LQ8WWM7 1075 aaKnown RBP8.39□□□□□ -1.07
VCAN-208ENST00000512590 MRI1Q9BV20 369 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 RTL8AQ9BWD3 113 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 TPT1P8Q9HAU6 139 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 DNAJB4Q9UDY4 337 aa8.39□□□□□ -1.07
VCAN-208ENST00000512590 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
VCAN-208ENST00000512590 PRSS38A1L453 326 aa8.38□□□□□ -1.07
VCAN-208ENST00000512590 BPIP17213 487 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms