RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ZBTB25	P24278	435 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	ARHGDIB	P52566	201 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	RAG2	P55895	527 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	ARF5	P84085	180 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	PRKCE	Q02156	737 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	RPA4	Q13156	261 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	TSTA3	Q13630	321 aa	Predicted RBP	4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	SMC1A	Q14683	1233 aa	Known RBP	4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	CD226	Q15762	336 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	LCE3E	Q5T5B0	92 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	RAPH1	Q70E73	1250 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	SLC22A16	Q86VW1	577 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	TICAM2	Q86XR7	235 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	HDDC3	Q8N4P3	179 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	MRPL43	Q8N983	215 aa	Known RBP	4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	RFESD	Q8TAC1	157 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	SLCO4A1	Q96BD0	722 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF560	Q96MR9	790 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	MAPKAP1	Q9BPZ7	522 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	KCNMB3	Q9NPA1	279 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	CENPM	Q9NSP4	180 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	STARD5	Q9NSY2	213 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	CLUH	O75153	1309 aa		4.11	□□□□□ -1.75
LINC01088-208	ENST00000511895	MYO16	Q9Y6X6	1858 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	MACROD2	A1Z1Q3	448 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895		A8MX80	341 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	RHOBTB1	O94844	696 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	HOXB7	P09629	217 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	GHR	P10912	638 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	LAMP1	P11279	417 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	IDS	P22304	550 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	NPY2R	P49146	381 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	MEOX2	P50222	304 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	CNN1	P51911	297 aa	Known RBP	4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	UCN	P55089	124 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	NLRP11	P59045	1033 aa	Known RBP	4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	HAND2	P61296	217 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	CNTN2	Q02246	1040 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	BNIP1	Q12981	228 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	CCDC57	Q2TAC2	916 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	C2orf66	Q6UXQ4	117 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	ERICH1	Q86X53	443 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895		Q8N9G6	341 aa	Predicted RBP	4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	MLKL	Q8NB16	471 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	COLGALT1	Q8NBJ5	622 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	SPC24	Q8NBT2	197 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	TMEM37	Q8WXS4	190 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	LHX4	Q969G2	390 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	B3GALT6	Q96L58	329 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	APOO	Q9BUR5	198 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	NLN	Q9BYT8	704 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	MID1IP1	Q9NPA3	183 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	HPS4	Q9NQG7	708 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	NDRG2	Q9UN36	371 aa	Known RBP	4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF175	Q9Y473	711 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	NRCAM	Q92823	1304 aa		4.1	□□□□□ -1.75
LINC01088-208	ENST00000511895	CUBN	O60494	3623 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	SDK2	Q58EX2	2172 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	VPS37C	A5D8V6	355 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	TYROBP	O43914	113 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	NME2P1	O60361	137 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	WNT2	P09544	360 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	ACP1	P24666	158 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	ZNF33B	Q06732	778 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	TGIF1	Q15583	401 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	CARTPT	Q16568	116 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	C2orf76	Q3KRA6	126 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	BEND3	Q5T5X7	828 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	TSEN54	Q7Z6J9	526 aa	Known RBP	4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	PRR22	Q8IZ63	422 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	LEMD2	Q8NC56	503 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	P3H4	Q92791	437 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	FGF14	Q92915	247 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	DTD2	Q96FN9	168 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	EEF2KMT	Q96G04	330 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	C9orf85	Q96MD7	179 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	NAP1L3	Q99457	506 aa	Predicted RBP	4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	PAXX	Q9BUH6	204 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	TSPY26P	Q9H489	355 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	ABCB10	Q9NRK6	738 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	HEBP1	Q9NRV9	189 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	FAM153A	Q9UHL3	310 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	TDRKH	Q9Y2W6	561 aa	Known RBP	4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	RNF115	Q9Y4L5	304 aa		4.09	□□□□□ -1.75
LINC01088-208	ENST00000511895	FOCAD	Q5VW36	1801 aa		4.09	□□□□□ -1.76
LINC01088-208	ENST00000511895	NAV1	Q8NEY1	1877 aa		4.09	□□□□□ -1.76
LINC01088-208	ENST00000511895	MFSD2B	A6NFX1	497 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	C11orf98	E9PRG8	122 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	ARPC1B	O15143	372 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	DUSP14	O95147	198 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZNF19	P17023	458 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	MAT2A	P31153	395 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	NOP14	P78316	857 aa	Known RBP	4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	SEMG2	Q02383	582 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	ZNF85	Q03923	595 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	CCDC173	Q0VFZ6	552 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	MAPK6	Q16659	721 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	QRICH1	Q2TAL8	776 aa		4.08	□□□□□ -1.76
LINC01088-208	ENST00000511895	CCDC184	Q52MB2	194 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms