RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PIGMQ9H3S5 423 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 LIME1Q9H400 295 aa11.91□□□□□ -0.5
RNF4-215ENST00000511843 FOXD3Q9UJU5 478 aaPredicted RBP11.91□□□□□ -0.5
RNF4-215ENST00000511843 A6NNC1 897 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 ADAMDEC1O15204 470 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 SYNGR4O95473 234 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 AGR2O95994 175 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 CGAP01215 116 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 IL6P05231 212 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 CRHP06850 196 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 CD1EP15812 388 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 RYKP34925 604 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 EIF1P41567 113 aaKnown RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 POLR2JP52435 117 aaKnown RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 PPP2R2AP63151 447 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 HPCAP84074 193 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 CBFBQ13951 182 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 FGFBP1Q14512 234 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 GUSBP1Q15486 140 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 TMEM176BQ3YBM2 270 aaPredicted RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 ZNF474Q6S9Z5 364 aaPredicted RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 ESPNLQ6ZVH7 1005 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 ZNF619Q8N2I2 560 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 MIER2Q8N344 545 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 TRIML2Q8N7C3 387 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 GOLGA6L1Q8N7Z2 621 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 GLB1L3Q8NCI6 653 aaPredicted RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 ZFP90Q8TF47 636 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 DNAJA3Q96EY1 480 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 SAP130Q9H0E3 1048 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 ARGLU1Q9NWB6 273 aaPredicted RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 ZIM2Q9NZV7 527 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 STOML1Q9UBI4 398 aa11.9□□□□□ -0.5
RNF4-215ENST00000511843 GPC6Q9Y625 555 aaPredicted RBP11.9□□□□□ -0.5
RNF4-215ENST00000511843 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 MSTNO14793 375 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 POLR3GO15318 223 aaPredicted RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 ADAM11O75078 769 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 ANP32DO95626 131 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 NTN1O95631 604 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 PLGP00747 810 aaPredicted RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 FCGR2AP12318 317 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 ETFAP13804 333 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 KLK2P20151 261 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 CAPN3P20807 821 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 ELK4P28324 431 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 CCKARP32238 428 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 PGM1P36871 562 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 MVDP53602 400 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 AQP5P55064 265 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 CARD18P57730 90 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 SORDQ00796 357 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 POU4F3Q15319 338 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 EXOC3L2Q2M3D2 409 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 C6orf10Q5SRN2 563 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 SLC2A7Q6PXP3 512 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 EIF3MQ7L2H7 374 aaKnown RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 CNOT9Q92600 299 aaKnown RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 LAT2Q9GZY6 243 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 SLC38A1Q9H2H9 487 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 CLEC4MQ9H2X3 399 aaPredicted RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 COQ10BQ9H8M1 238 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 POLE3Q9NRF9 147 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 RASSF1Q9NS23 344 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 MCTS1Q9ULC4 181 aaKnown RBP11.89□□□□□ -0.51
RNF4-215ENST00000511843 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
RNF4-215ENST00000511843 PRR14LQ5THK1 2151 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 IGHV3-15A0A0B4J1V0 119 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 FAM234BA2RU67 622 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 FAM221AA4D161 298 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 SH3D21A4FU49 640 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 NR5A2O00482 541 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 AP3D1O14617 1153 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 NR2F1P10589 423 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 EPXP11678 715 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 PEX19P40855 299 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 CRATP43155 626 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 KCNJ5P48544 419 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 CTBP2P56545 445 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 SESN3P58005 492 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 MERTKQ12866 999 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 MAPK11Q15759 364 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 RPS26P11Q5JNZ5 115 aaPredicted RBP11.88□□□□□ -0.51
RNF4-215ENST00000511843 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 FAM214BQ7L5A3 538 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 ZNF550Q7Z398 422 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 FAM71CQ8NEG0 241 aa11.88□□□□□ -0.51
RNF4-215ENST00000511843 ITCHQ96J02 903 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms