RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	TNFSF15	O95150	251 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	SERPINA7	P05543	415 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	LINGO3	P0C6S8	592 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	CHM	P24386	653 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	CBFB	Q13951	182 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.21	□□□□□ -0.61
CAST-233	ENST00000510756	NNAT	Q16517	81 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	TMEM44	Q2T9K0	475 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	BTBD16	Q32M84	506 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	ZNF791	Q3KP31	576 aa	Predicted RBP	11.21	□□□□□ -0.61
CAST-233	ENST00000510756	TMEM201	Q5SNT2	666 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	ANKRD34A	Q69YU3	496 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	GALNT5	Q7Z7M9	940 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	DTX1	Q86Y01	620 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	RHOXF1	Q8NHV9	184 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	PHOSPHO1	Q8TCT1	267 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.21	□□□□□ -0.61
CAST-233	ENST00000510756	ST8SIA1	Q92185	356 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	SPACA9	Q96E40	222 aa	Predicted RBP	11.21	□□□□□ -0.61
CAST-233	ENST00000510756	FRMD6	Q96NE9	622 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	NRSN2	Q9GZP1	204 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	FLRT3	Q9NZU0	649 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	FOXJ2	Q9P0K8	574 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	SDK2	Q58EX2	2172 aa		11.21	□□□□□ -0.61
CAST-233	ENST00000510756	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.21	□□□□□ -0.62
CAST-233	ENST00000510756	ANKRD33B	A6NCL7	494 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	TP53	P04637	393 aa	Predicted RBP	11.21	□□□□□ -0.62
CAST-233	ENST00000510756	UBTFL6	P0CB48	400 aa	Predicted RBP	11.21	□□□□□ -0.62
CAST-233	ENST00000510756	GKN3P	P0CG01	181 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	SDHB	P21912	280 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	RBMS1	P29558	406 aa	Known RBP	11.21	□□□□□ -0.62
CAST-233	ENST00000510756	SLC1A3	P43003	542 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	RFX3	P48380	749 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	GAS1	P54826	345 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	CDK5	Q00535	292 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	CD47	Q08722	323 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	CDK5R2	Q13319	367 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	RAPSN	Q13702	412 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	CRTC2	Q53ET0	693 aa	Predicted RBP	11.21	□□□□□ -0.62
CAST-233	ENST00000510756	ALG10B	Q5I7T1	473 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	C3orf38	Q5JPI3	329 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	SLC30A6	Q6NXT4	461 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	HMGN2P46	Q86SG4	172 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	NKAIN4	Q8IVV8	208 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	ZNF614	Q8N883	585 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	TMEM234	Q8WY98	164 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	DTNBP1	Q96EV8	351 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	LMF1	Q96S06	567 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	CDH10	Q9Y6N8	788 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	LAMA1	P25391	3075 aa		11.21	□□□□□ -0.62
CAST-233	ENST00000510756	ANKUB1	A6NFN9	424 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756		M0R3G1	203 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	GABRB1	P18505	474 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	FKBP2	P26885	142 aa	Known RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	SMS	P52788	366 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	MLF1	P58340	268 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	PTGES3	Q15185	160 aa	Known RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	CD226	Q15762	336 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	TMEM154	Q6P9G4	183 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	APOOL	Q6UXV4	268 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	ATG4D	Q86TL0	474 aa	Predicted RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	ADAMTS17	Q8TE56	1095 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	C3orf49	Q96BT1	292 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	C8orf44	Q96CB5	159 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	SGCZ	Q96LD1	299 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756		Q96MT0	163 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	RASL10B	Q96S79	203 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	FAM86C1	Q9NVL1	165 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	TPRKB	Q9Y3C4	175 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	RCBTB2	O95199	551 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	ANGPTL1	O95841	491 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	SMIM18	P0DKX4	95 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	CRHBP	P24387	322 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	COL9A2	Q14055	689 aa	Predicted RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	CCDC157	Q569K6	752 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	SLC25A53	Q5H9E4	307 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	MEDAG	Q5VYS4	303 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	PRICKLE2	Q7Z3G6	844 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	ZNF786	Q8N393	782 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	TSPAN14	Q8NG11	270 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	OR8J1	Q8NGP2	316 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	B4GALNT2	Q8NHY0	566 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	GTPBP3	Q969Y2	492 aa	Known RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	POLDIP3	Q9BY77	421 aa	Known RBP	11.2	□□□□□ -0.62
CAST-233	ENST00000510756	SH2D2A	Q9NP31	389 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	MUC3A	Q02505	3323 aa		11.2	□□□□□ -0.62
CAST-233	ENST00000510756	PTPRB	P23467	1997 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	FZD7	O75084	574 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	HMGN1	P05114	100 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	POLR2I	P36954	125 aa	Known RBP	11.19	□□□□□ -0.62
CAST-233	ENST00000510756	DLST	P36957	453 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	NR1H2	P55055	460 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	ZNF117	Q03924	483 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	RTP5	Q14D33	572 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	OCLN	Q16625	522 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	ZNF620	Q6ZNG0	422 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	NRM	Q8IXM6	262 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	TEX47	Q8TBZ9	253 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	TMEM255B	Q8WV15	326 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	NDEL1	Q9GZM8	345 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms