RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 OR4K2Q8NGD2 314 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR4K13Q8NH42 304 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF461Q8TAF7 563 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PPP1R35Q8TAP8 253 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLC35B2Q8TB61 432 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF606Q8WXB4 792 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GDF15Q99988 308 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 USB1Q9BQ65 265 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 DUSP26Q9BV47 211 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SEC11CQ9BY50 192 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SEPSECSQ9HD40 501 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 Q9N2K0 584 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ZCCHC3Q9NUD5 404 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 MRPL15Q9P015 296 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CNTN3Q9P232 1028 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 EBF1Q9UH73 591 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 POMT2Q9UKY4 750 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 WASHC3Q9Y3C0 194 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR10H1Q9Y4A9 318 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 DNMT3AQ9Y6K1 912 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 HMSDA8MTL9 139 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GPR42O15529 346 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GPR39O43194 453 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 HBP1O60381 514 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SEMA7AO75326 666 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 STC2O76061 302 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLITRK3O94933 977 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TRUB2O95900 331 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 JCHAINP01591 159 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TFPTP0C1Z6 253 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 FAM163BP0C2L3 166 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PIPP12273 146 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF8P17098 575 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 TCN2P20062 427 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SOX3P41225 446 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CSKP41240 450 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NOVA1P51513 510 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 SCAND1P57086 179 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TAS2R45P59539 299 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PLP1P60201 277 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 HERVK_113P61574 105 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MAMLD1Q13495 774 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLC10A1Q14973 349 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF805Q5CZA5 627 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PPM1JQ5JR12 505 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF20Q5VT98 475 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 STUMQ69YW2 141 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PLAG1Q6DJT9 500 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLC24A5Q71RS6 500 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 RNF44Q7L0R7 432 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MDGA2Q7Z553 956 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 THNSL2Q86YJ6 484 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TMEM151BQ8IW70 566 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CNTN4Q8IWV2 1026 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SIRT2Q8IXJ6 389 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TMEM183AQ8IXX5 376 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 BATF2Q8N1L9 274 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR4M1Q8NGD0 313 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR6M1Q8NGM8 313 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR8U1Q8NH10 309 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 KCNG3Q8TAE7 436 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PHOSPHO2Q8TCD6 241 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 LMX1AQ8TE12 382 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SH3RF2Q8TEC5 729 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 HOXB13Q92826 284 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 INTS12Q96CB8 462 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CMTM7Q96FZ5 175 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SFRP2Q96HF1 295 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TTPALQ9BTX7 342 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ALG8Q9BVK2 526 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ENKD1Q9H0I2 346 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 RNF208Q9H0X6 261 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 IKZF4Q9H2S9 585 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PIF1Q9H611 641 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 DDX4Q9NQI0 724 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 SLC39A9Q9NUM3 307 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 RHCGQ9UBD6 479 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 IL20RAQ9UHF4 553 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CPA4Q9UI42 421 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLCO3A1Q9UIG8 710 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR52A1Q9UKL2 312 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SSUH2Q9Y2M2 353 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NOX1Q9Y5S8 564 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SSC5DA1L4H1 1573 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 A6NLC8 198 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SEPT4O43236 478 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 BCL2L11O43521 198 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CACNG3O60359 315 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 UGDHO60701 494 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 BBOX1O75936 387 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 KLF8O95600 359 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 ALDH2P05091 517 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PCCBP05166 539 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 C8AP07357 584 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 RAC2P15153 192 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NDUFB7P17568 137 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NELFEP18615 380 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms