RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 C1QCP02747 245 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 ME2P23368 584 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 IL32P24001 234 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 ELK4P28324 431 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 PLAURQ03405 335 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 SPOCK1Q08629 439 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 P2RY6Q15077 328 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 RNPS1Q15287 305 aaKnown RBP14.06□□□□□ -0.16
RAB40C-202ENST00000509637 CFAP157Q5JU67 520 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 DCST2Q5T1A1 773 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 PDSS1Q5T2R2 415 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 C11orf71Q6IPW1 123 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 B3GLCTQ6Y288 498 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 MISPQ8IVT2 679 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 C4orf33Q8N1A6 199 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 KRTCAP2Q8N6L1 136 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 OR5D16Q8NGK9 328 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 ZFP28Q8NHY6 868 aa14.06□□□□□ -0.16
RAB40C-202ENST00000509637 NANOS1Q8WY41 292 aaKnown RBP14.06□□□□□ -0.16
RAB40C-202ENST00000509637 KISS1RQ969F8 398 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-202ENST00000509637 CISD1Q9NZ45 108 aaKnown RBP14.06□□□□□ -0.16
RAB40C-202ENST00000509637 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 A0A1W2PP18 115 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 E7EQL1 145 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 H3BQF6 201 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 PIP5K1BO14986 540 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 PGM3O95394 542 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 EIF1P41567 113 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 SERPINB4P48594 390 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 CCT3P49368 545 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 ATP12AP54707 1039 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 RPS26P62854 115 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 PTGR1Q14914 329 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 QPRTQ15274 297 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 CCDC153Q494R4 210 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 Q6ZT83 130 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 MTERF4Q7Z6M4 381 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 OR10H5Q8NGA6 315 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 RFWD2Q8NHY2 731 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 EPS8L3Q8TE67 593 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 DNAJA3Q96EY1 480 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 TRMT61AQ96FX7 289 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 MRGPRX4Q96LA9 322 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 SDF2Q99470 211 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 RHOXF2Q9BQY4 288 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 MECRQ9BV79 373 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 ACTRT3Q9BYD9 372 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 POTEKPQ9BYX7 375 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 ESRP2Q9H6T0 727 aaKnown RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 GP6Q9HCN6 339 aa14.05□□□□□ -0.16
RAB40C-202ENST00000509637 GPC6Q9Y625 555 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-202ENST00000509637 GOLGA8QA0A0J9YX86 632 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 A0A1W2PR80 420 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 GOLGA8OA6NCC3 632 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 RNF212BA8MTL3 300 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 GOLGA8NF8WBI6 632 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 FCMRO60667 390 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 CYTIPO60759 359 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 NUDT14O95848 222 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 FGF4P08620 206 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 HPGDP15428 266 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 COX5AP20674 150 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 ALDH3A1P30838 453 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 RAC3P60763 192 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 MAPK14Q16539 360 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 XKR7Q5GH72 579 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 RIMKLAQ8IXN7 391 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 ZNF433Q8N7K0 673 aaPredicted RBP14.04□□□□□ -0.16
RAB40C-202ENST00000509637 ZNF527Q8NB42 609 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 OR5AK3PQ8NH89 298 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 TWIST2Q8WVJ9 160 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
RAB40C-202ENST00000509637 GTPBP3Q969Y2 492 aaKnown RBP14.04□□□□□ -0.16
RAB40C-202ENST00000509637 COQ8BQ96D53 544 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 MTERF3Q96E29 417 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 OR7D2Q96RA2 312 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 SNX8Q9Y5X2 465 aa14.04□□□□□ -0.16
RAB40C-202ENST00000509637 MALRD1Q5VYJ5 2156 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SMIM23A6NLE4 172 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SSX4O60224 188 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 PEX11AO75192 247 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 IGHV3-9P01782 118 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 PABPC4LP0CB38 370 aaKnown RBP14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SUMO3P55854 103 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SESN3P58005 492 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 NAA20P61599 178 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 RASGEF1BQ0VAM2 473 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SKP2Q13309 424 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 TP53BP2Q13625 1128 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 PPA1Q15181 289 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 STK11Q15831 433 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 TIGD2Q4W5G0 525 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 ARL13AQ5H913 290 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-202ENST00000509637 PDZK1Q5T2W1 519 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 ZCCHC23Q6ZST2 131 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 IFT20Q8IY31 132 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms