RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CPOXP36551 454 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 PGM1P36871 562 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 CRATP43155 626 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 KIR2DL3P43628 341 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 LHX2P50458 406 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 ASCL1P50553 236 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 ATP12AP54707 1039 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 GFRA1P56159 465 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 CLDN15P56746 228 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 PCBP3P57721 371 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 EEFSECP57772 596 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 LRRC74AQ0VAA2 488 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 SNTB1Q13884 538 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 GANABQ14697 944 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF141Q15928 474 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 FLYWCH1Q4VC44 716 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 COQ5Q5HYK3 327 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 FBXW10Q5XX13 1052 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 BHLHB9Q6PI77 547 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 PLXDC2Q6UX71 529 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 SLC15A3Q8IY34 581 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 C9orf106Q8NAJ2 232 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 OR5M1Q8NGP8 315 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 OR10A6Q8NH74 314 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 NFKBIDQ8NI38 313 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 RP9Q8TA86 221 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 POC1BQ8TC44 478 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 INTS12Q96CB8 462 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 C14orf79Q96F83 325 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 SH3YL1Q96HL8 342 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF583Q96ND8 569 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 TRNT1Q96Q11 434 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 TREX2Q9BQ50 279 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 PIGQQ9BRB3 760 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 PIF1Q9H611 641 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 MCCC2Q9HCC0 563 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 A4GALTQ9NPC4 353 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 UBQLN4Q9NRR5 601 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 RLIMQ9NVW2 624 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 KCNN3Q9UGI6 736 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 VDAC3Q9Y277 283 aa7.89□□□□□ -1.15
PDLIM5-213ENST00000509357 MPDZO75970 2070 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 A0A1W2PQD3 144 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 MBD3L4A6NDZ8 208 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 MBD3L3A6NE82 208 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 MBD3L5A6NJ08 208 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 SLC22A20A6NK97 555 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 BBIP1A8MTZ0 92 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 H0YC42 278 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 H3BNH8 94 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 LINC01387J3KSC0 135 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 GTPBP1O00178 669 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 SYT5O00445 386 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 AP3D1O14617 1153 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 STX11O75558 287 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 KRT75O95678 551 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 NUDT14O95848 222 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 GUSBP08236 651 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PRG2P13727 222 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF708P17019 499 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PSMA4P25789 261 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 SHC1P29353 583 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PRDX6P30041 224 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PEX19P40855 299 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF41P51814 821 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF136P52737 540 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 TPD52P55327 224 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 RPS3AP61247 264 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 EEF1A1P68104 462 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 DMTNQ08495 405 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 SKP2Q13309 424 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 FGFBP1Q14512 234 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 BCL2A1Q16548 175 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 SGCBQ16585 318 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 TMEM44Q2T9K0 475 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 GPAT3Q53EU6 434 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF836Q6ZNA1 936 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 LRRC74BQ6ZQY2 392 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 KIF18BQ86Y91 864 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 LURAP1LQ8IV03 231 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 GCNT2Q8N0V5 402 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF619Q8N2I2 560 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 CLIP4Q8N3C7 705 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 TRIML2Q8N7C3 387 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF614Q8N883 585 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF527Q8NB42 609 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 CCDC197Q8NCU1 140 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 GPR32P1Q8NGA4 272 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 OR4D11Q8NGI4 311 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 MBD3L2Q8NHZ7 208 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PHOSPHO1Q8TCT1 267 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 BCAS4Q8TDM0 211 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 CNOT9Q92600 299 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 RNASE6Q93091 150 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 WNT2BQ93097 391 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 C1GALT1C1Q96EU7 318 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PRRG4Q9BZD6 226 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms