RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 C10orf90Q96M02 699 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 TECTBQ96PL2 329 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 CLCC1Q96S66 551 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 TMEM175Q9BSA9 504 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 RHNO1Q9BSD3 238 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 APOOQ9BUR5 198 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 PINK1Q9BXM7 581 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 ANKRD60Q9BZ19 345 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC7A5P2Q9GIP4 190 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 ROGDIQ9GZN7 287 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 HDHD2Q9H0R4 259 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC25A51Q9H1U9 297 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR52A5Q9H2C5 316 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 GAL3ST2Q9H3Q3 398 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 ELOVL6Q9H5J4 265 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 NARFLQ9H6Q4 476 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 ALG9Q9H6U8 611 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 EGLN3Q9H6Z9 239 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 SPACA1Q9HBV2 294 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 TREM1Q9NP99 234 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCNB1IP1Q9NPC3 277 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZC4H2Q9NQZ6 224 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 NANSQ9NR45 359 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC7A10Q9NS82 523 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 DCAF13Q9NV06 445 aaKnown RBP2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 NUDT15Q9NV35 164 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 C2orf42Q9NWW7 574 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 PAK5Q9P286 719 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 STX18Q9P2W9 335 aaKnown RBP2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 EIF3KQ9UBQ5 218 aaKnown RBP2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 PISDQ9UG56 409 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 MTRF1LQ9UGC7 380 aaKnown RBP2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 EMCNQ9ULC0 261 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 TBC1D24Q9ULP9 559 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 COPS3Q9UNS2 423 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 FLVCR2Q9UPI3 526 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 STARD10Q9Y365 291 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 GMPPBQ9Y5P6 360 aa2.04□□□□□ -2.08
DEPDC1B-204ENST00000509006 PRRC2AP48634 2157 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 USP47Q96K76 1375 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 FRMPD4Q14CM0 1322 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 TRBV7-9A0A0J9YWB2 115 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR6C65A6NJZ3 312 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 GABRR3A8MPY1 467 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 SERPINE3A8MV23 424 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 HHLA1C9JL84 531 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 H7C0C1 242 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 PDLIM1O00151 329 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 FOXE1O00358 373 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 AIM2O14862 343 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 BCKDKO14874 412 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 SURF4O15260 269 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 INPP4BO15327 924 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CLOCKO15516 846 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 TAPBPO15533 448 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CTSVO60911 334 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 HSBP1O75506 76 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 NOL4O94818 638 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 AP2A2O94973 939 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 DIRAS1O95057 198 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 AP2A1O95782 977 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 IGSF6O95976 241 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CST1P01037 141 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 NR3C1P04150 777 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CD48P09326 243 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 FAM157CP0CG43 387 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 MYL2P10916 166 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC2A2P11168 524 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 UMPSP11172 480 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ATP1B2P14415 290 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF26P17031 533 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 RPL35AP18077 110 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 MMP11P24347 488 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ATP5A1P25705 553 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 GNA11P29992 359 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 PRDX3P30048 256 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 FOXN2P32314 431 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 RORAP35398 523 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZFP36L2P47974 494 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CX3CR1P49238 355 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 MRPL19P49406 292 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 PGFP49763 221 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ATP1B3P54709 279 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 CLDN18P56856 261 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 KCNJ2P63252 427 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ENPEPQ07075 957 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 RGS1Q08116 209 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 RBBP4Q09028 425 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 GPR17Q13304 367 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF74Q16587 644 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF239Q16600 458 aaKnown RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF829Q3KNS6 432 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 PTPN20Q4JDL3 420 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 TEX44Q53QW1 395 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC25A53Q5H9E4 307 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 TCHHL1Q5QJ38 904 aaPredicted RBP2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLX4IPQ5VYV7 408 aa2.03□□□□□ -2.08
DEPDC1B-204ENST00000509006 AP1ARQ63HQ0 302 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms