RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF195O14628 629 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 ADAMDEC1O15204 470 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 AK1P00568 194 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 CSTAP01040 98 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 CD8BP10966 210 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 DNASE1P24855 282 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 UGT2B10P36537 528 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 EIF1P41567 113 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 SUMO3P55854 103 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 CARD18P57730 90 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 OCRLQ01968 901 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 FUT5Q11128 374 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 SKP2Q13309 424 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 CBFBQ13951 182 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 GUSBP1Q15486 140 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 MAPK14Q16539 360 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 TMEM176BQ3YBM2 270 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 RNF130Q86XS8 419 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 LRRC34Q8IZ02 419 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 OR5W2Q8NH69 310 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 ROPN1LQ96C74 230 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 NEURL3Q96EH8 262 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 ZBTB18Q99592 522 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 NMUR2Q9GZQ4 415 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF350Q9GZX5 532 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 QRSL1Q9H0R6 528 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 PAQR5Q9NXK6 330 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 WDR45Q9Y484 360 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 TESMINQ9Y4I5 508 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 GPR45Q9Y5Y3 372 aa13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 GPC6Q9Y625 555 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 MAP1AP78559 2803 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-228ENST00000508974 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 CCDC154A6NI56 674 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 KIAA0513O60268 411 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 EIF4E2O60573 245 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 BCAS1O75363 584 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 HRGP04196 525 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 PGRP06401 933 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ELK4P28324 431 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 HPCAP84074 193 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 FGFBP1Q14512 234 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF141Q15928 474 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF239Q16600 458 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 TYW3Q6IPR3 259 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 HEPHL1Q6MZM0 1159 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 PAMR1Q6UXH9 720 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 SPNS3Q6ZMD2 512 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF621Q6ZSS3 439 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 MAVSQ7Z434 540 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 OR6K3Q8NGY3 331 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ABHD3Q8WU67 409 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ARL8AQ96BM9 186 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 DNAJA3Q96EY1 480 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 PIK3IP1Q96FE7 263 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 CCDC115Q96NT0 180 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 OR52B2Q96RD2 323 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ELOVL5Q9NYP7 299 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 BTNL2Q9UIR0 455 aa13.24□□□□□ -0.29
UBE2D3-228ENST00000508974 ABCA4P78363 2273 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 PRAMEF27A3QJZ7 478 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 CLDN24A6NM45 220 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 HMGN4O00479 90 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 H6PDO95479 791 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 NTN1O95631 604 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 AGR2O95994 175 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 CD1EP15812 388 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 AGTR1P30556 359 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC7A1P30825 629 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 RYKP34925 604 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 SLC18A1P54219 525 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 KEAP1Q14145 624 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 SYPL1Q16563 259 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 COX20Q5RI15 118 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 EIF3MQ7L2H7 374 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 ZNF619Q8N2I2 560 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 TRIML2Q8N7C3 387 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 RAB3IL1Q8TBN0 382 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 ZFP90Q8TF47 636 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 NINJ1Q92982 152 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 ZG16BQ96DA0 208 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 MRGPRX4Q96LA9 322 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 LAT2Q9GZY6 243 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 COQ10BQ9H8M1 238 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
UBE2D3-228ENST00000508974 ITPR3Q14573 2671 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms