RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SUMO3P55854 103 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 CHRNB3Q05901 458 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 SPOCK1Q08629 439 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 RASGEF1BQ0VAM2 473 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 TRADDQ15628 312 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 UAP1Q16222 522 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 CR1LQ2VPA4 569 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 TMEM176BQ3YBM2 270 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 GPRIN3Q6ZVF9 776 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ZAR1Q86SH2 424 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 TMEM151AQ8N4L1 468 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 CDRT4Q8N9R6 151 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 CEP70Q8NHQ1 597 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 METTL6Q8TCB7 284 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF75CPQ92670 426 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 INPP5KQ9BT40 448 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 MYNNQ9NPC7 610 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 EQTNQ9NQ60 294 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 NTMQ9P121 344 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ACTL7BQ9Y614 415 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 SLC25A15Q9Y619 301 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 SCDO00767 359 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 SMAD9O15198 467 aaKnown RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ATP8B1O43520 1251 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 LY6HO94772 140 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 SUPT7LO94864 414 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 HSPA4LO95757 839 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 TGFAP01135 160 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ENO1P06733 434 aaKnown RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ITGA2P17301 1181 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 APOBEC3AP31941 199 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF83P51522 516 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 BTKQ06187 659 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 SELENBP1Q13228 472 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 CASP8Q14790 479 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 CD226Q15762 336 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 UNC50Q53HI1 259 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF678Q5SXM1 525 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FBXW9Q5XUX1 488 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF551Q7Z340 670 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 HDXQ7Z353 690 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 OR52N5Q8NH56 324 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FAM76AQ8TAV0 307 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 GIMAP5Q96F15 307 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 MRGPRX4Q96LA9 322 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF300Q96RE9 604 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FMO2Q99518 471 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 PIMREGQ9BSJ6 248 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FUT8Q9BYC5 575 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 MYOZ1Q9NP98 299 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-211ENST00000508546 STK38LQ9Y2H1 464 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 FKBP7Q9Y680 259 aa8.25□□□□□ -1.09
NEDD9-211ENST00000508546 IGHV3-15A0A0B4J1V0 119 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 IGHV4-61A0A0C4DH41 118 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 LOC390937A0A1W2PQ73 354 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 RAD51DO75771 328 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 FAM153BP0C7A2 387 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ACP2P11117 423 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF23P17027 643 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 PRKCAP17252 672 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 SLC7A1P30825 629 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 SERPINB4P48594 390 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 P2RX1P51575 399 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF117Q03924 483 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 HSPB3Q12988 150 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 FAM153CQ494X1 144 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 SLC25A53Q5H9E4 307 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
NEDD9-211ENST00000508546 C1QTNF12Q5T7M4 302 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZCCHC12Q6PEW1 402 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZDHHC24Q6UX98 284 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 IKBIPQ70UQ0 350 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 GALNT5Q7Z7M9 940 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 MREGQ8N565 214 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 SLC16A11Q8NCK7 471 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF540Q8NDQ6 660 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 NUP43Q8NFH3 380 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 CDC26Q8NHZ8 85 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 PHOSPHO1Q8TCT1 267 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF764Q96H86 408 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-211ENST00000508546 MUS81Q96NY9 551 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 IQCGQ9H095 443 aaKnown RBP8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 FKRPQ9H9S5 495 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ZDHHC18Q9NUE0 388 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 ICAM5Q9UMF0 924 aa8.24□□□□□ -1.09
NEDD9-211ENST00000508546 IGKV3D-15A0A087WSY6 115 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 A0A0A6YYJ9 748 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 A0A1W2PNR3 127 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 CIB4A0PJX0 185 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 C9JVG2 144 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 SLCO1B7G3V0H7 640 aa8.23□□□□□ -1.09
NEDD9-211ENST00000508546 M0R1B8 84 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms