RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CNTN4Q8IWV2 1026 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC35F3Q8IY50 421 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC43A2Q8N370 569 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 Q8N402 240 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 DNAJC22Q8N4W6 341 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RNF152Q8N8N0 203 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MCPH1Q8NEM0 835 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PRSS33Q8NF86 280 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 DMBX1Q8NFW5 382 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 OR52K1Q8NGK4 314 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 OR8D4Q8NGM9 314 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CREB3L4Q8TEY5 395 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 GLYATL2Q8WU03 294 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SELENOMQ8WWX9 145 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SEMA4DQ92854 862 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM162AQ96A26 154 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ORAI1Q96D31 301 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PHYHIPLQ96FC7 376 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 C7orf34Q96L11 122 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 KCTD7Q96MP8 289 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NEDD4LQ96PU5 975 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CSPG4P5Q96PW8 444 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RBP7Q96R05 134 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MCCC1Q96RQ3 725 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PFDN5Q99471 154 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MGLLQ99685 303 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NUDT22Q9BRQ3 303 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CBWD1Q9BRT8 395 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM43Q9BTV4 400 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 GABARAPL3Q9BY60 117 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MMP28Q9H239 520 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RIBC2Q9H4K1 309 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 POMKQ9H5K3 350 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 DHX35Q9H5Z1 703 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 DDX31Q9H8H2 851 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 HEXA-AS1Q9H8Q6 139 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 REEP1Q9H902 201 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PLAC1Q9HBJ0 212 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ISYNA1Q9NPH2 558 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NIT2Q9NQR4 276 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PRMT8Q9NR22 394 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ZFP57Q9NU63 452 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 HIF1ANQ9NWT6 349 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 METTL1Q9UBP6 276 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF222Q9UK12 451 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 IKZF3Q9UKT9 509 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 POMT2Q9UKY4 750 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 TBX20Q9UMR3 447 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 POLR3HQ9Y535 204 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NPTNQ9Y639 398 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FOCADQ5VW36 1801 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MICAL3Q7RTP6 2002 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 ZFHX4Q86UP3 3567 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 MED19A0JLT2 244 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 CIB4A0PJX0 185 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 TMEM218A2RU14 115 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM220BPB1ANY3 271 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 TSTD3H0UI37 97 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 DNASE2O00115 360 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 DFFAO00273 331 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 UBE2CO00762 179 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 AP3D1O14617 1153 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 CASKO14936 926 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 AZIN1O14977 448 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 HNRNPDLO14979 420 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 NPC1O15118 1278 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC31A2O15432 143 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 NUPL2O15504 423 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 SELENOFO60613 162 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 REM1O75628 298 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 PSMD10O75832 226 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 VNN2O95498 520 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 AP2A1O95782 977 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 MLYCDO95822 493 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 MT-CYBP00156 380 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 RLN2P04090 185 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 SERPINA5P05154 406 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 GIPP09681 153 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 UBBP0CG47 229 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 UBCP0CG48 685 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 G6PDP11413 515 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 ANXA8P13928 327 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 ARF4P18085 180 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 EGR1P18146 543 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 OGNP20774 298 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 CAPN3P20807 821 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 GALP22466 123 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 HRH2P25021 359 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 ATP5A1P25705 553 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 HTR2AP28223 471 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 MIPP30301 263 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 FMO3P31513 532 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 SFNP31947 248 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 GGT2P36268 569 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 PIGAP37287 484 aa4.21□□□□□ -1.74
PDLIM5-211ENST00000508531 PMELP40967 661 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms