RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ADIPOR1Q96A54 375 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SLCO4A1Q96BD0 722 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SARAFQ96BY9 339 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TM4SF18Q96CE8 201 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 L3HYPDHQ96EM0 354 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 OR52B2Q96RD2 323 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SLC29A1Q99808 456 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CCDC32Q9BV29 185 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 FAIM2Q9BWQ8 316 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SHCBP1LQ9BZQ2 653 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 OR10A5Q9H207 317 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 MEAF6Q9HAF1 191 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ZFP64Q9NPA5 681 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ACKR4Q9NPB9 350 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 FARSBQ9NSD9 589 aaKnown RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SIRT5Q9NXA8 310 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TEX10Q9NXF1 929 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TNFRSF10DQ9UBN6 386 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 NUP50Q9UKX7 468 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 BAG5Q9UL15 447 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 BOKQ9UMX3 212 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TIMM22Q9Y584 194 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CHCHD2Q9Y6H1 151 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF407Q9C0G0 2248 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CENPXA8MT69 81 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 FAM166BA8MTA8 275 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 MANBAO00462 879 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 AQP7O14520 342 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 MRASO14807 208 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 UBDO15205 165 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNHIT1O43257 154 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 BCAS1O75363 584 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 OR4F21O95013 312 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ABCB1P08183 1280 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 COX6B1P14854 86 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 TCEA1P23193 301 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 SSTR4P31391 388 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 PIGAP37287 484 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 DDOSTP39656 456 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ETV6P41212 452 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 MAGEA5P43359 124 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 GSTM5P46439 218 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 RPS5P46782 204 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 DNASE1L1P49184 302 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ERFP50548 548 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 AP2S1P53680 142 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 RAD23AP54725 363 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CDH15P55291 814 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 NRG3P56975 720 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 DCAF7P61962 342 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 RPP38P78345 283 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 MGAT2Q10469 447 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 LCP2Q13094 533 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CDK10Q15131 360 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 SF3B4Q15427 424 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 FXNQ16595 210 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 PRICKLE4Q2TBC4 344 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 SPIN4Q56A73 249 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 AGAP6Q5VW22 663 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM198Q66K66 360 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 REP15Q6BDI9 236 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM81Q6P7N7 255 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 GPRIN3Q6ZVF9 776 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 RPS27LQ71UM5 84 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF767PQ75MW2 155 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 NUP54Q7Z3B4 507 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 LIX1LQ8IVB5 337 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 MCEMP1Q8IX19 187 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 SAMD14Q8IZD0 417 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 LRRC25Q8N386 305 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CDYL2Q8N8U2 506 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF555Q8NEP9 628 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 RND1Q92730 232 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CTHRC1Q96CG8 243 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 NTNG2Q96CW9 530 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 TMCO6Q96DC7 493 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 C11orf24Q96F05 449 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF681Q96N22 645 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 GAL3ST4Q96RP7 486 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 GATA5Q9BWX5 397 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ANGPTL4Q9BY76 406 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ENKD1Q9H0I2 346 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 PROK2Q9HC23 129 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 USE1Q9NZ43 259 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 KCNN3Q9UGI6 736 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 WARS2Q9UGM6 360 aaKnown RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CAB39Q9Y376 341 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-207ENST00000507401 TPRKBQ9Y3C4 175 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 CORINQ9Y5Q5 1042 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 NPFFR2Q9Y5X5 522 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF780BQ9Y6R6 833 aa7.34□□□□□ -1.23
SCN1A-207ENST00000507401 DNAJC13O75165 2243 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 TACC2O95359 2948 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NINQ8N4C6 2090 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 TRGV5A0A0B4J1U4 118 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms