RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GKN3PP0CG01 181 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 NCK1P16333 377 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 PRKCAP17252 672 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 TCN1P20061 433 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-210ENST00000506767 PGCP20142 388 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 CHMP24386 653 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ADH6P28332 368 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 RASSF2P50749 326 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF41P51814 821 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF136P52737 540 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 SELENOWP63302 87 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 HSF1Q00613 529 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 QPRTQ15274 297 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 NRF1Q16656 503 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ARHGAP11AQ6P4F7 1023 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 PGM2L1Q6PCE3 622 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 CBLL1Q75N03 491 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF550Q7Z398 422 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 GTPBP8Q8N3Z3 284 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-210ENST00000506767 TMCO5AQ8N6Q1 288 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 OR52E4Q8NGH9 312 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 SLC26A7Q8TE54 656 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ARHGDIGQ99819 225 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 WFDC6Q9BQY6 131 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 LDAHQ9H6V9 325 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 RPH3AQ9Y2J0 694 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 SLC6A5Q9Y345 797 aa11.63□□□□□ -0.55
TCOF1-210ENST00000506767 HELZ2Q9BYK8 2649 aaKnown RBP11.63□□□□□ -0.55
TCOF1-210ENST00000506767 OR2M5A3KFT3 312 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 OR14I1A6ND48 311 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 GSC2O15499 205 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 FRS3O43559 492 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 DNAJC8O75937 253 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 WISP1O95388 367 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 NUDT14O95848 222 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 ACTL6AO96019 429 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 PRG2P13727 222 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 ZNF17P17021 662 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 BMP7P18075 431 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 ME2P23368 584 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 RYKP34925 604 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 MSX2P35548 267 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 EIF1P41567 113 aaKnown RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 CCR4P51679 360 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 CRYZQ08257 329 aaKnown RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 BNIP2Q12982 314 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 IGFBP7Q16270 282 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 VASNQ6EMK4 673 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 GFRALQ6UXV0 394 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 GALNT11Q8NCW6 608 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 TMEM234Q8WY98 164 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 ST8SIA1Q92185 356 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 CLPTM1LQ96KA5 538 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 PIGQQ9BRB3 760 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
TCOF1-210ENST00000506767 PCDHAC1Q9H158 963 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 ACER3Q9NUN7 267 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 KLHL28Q9NXS3 571 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 MAGEL2Q9UJ55 1249 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 BAG5Q9UL15 447 aa11.62□□□□□ -0.55
TCOF1-210ENST00000506767 SHISA8B8ZZ34 492 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 FAM47E-STBD1D6RA91 191 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 ARPC2O15144 300 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 ZNHIT1O43257 154 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 EFNA2O43921 213 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 TPST2O60704 377 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 SERPINA1P01009 418 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 IDH2P48735 452 aaKnown RBP11.61□□□□□ -0.55
TCOF1-210ENST00000506767 SESN3P58005 492 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 NCALDP61601 193 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 MS4A2Q01362 244 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 GABPB1Q06547 395 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-210ENST00000506767 FOXF1Q12946 379 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 TRIM25Q14258 630 aaKnown RBP11.61□□□□□ -0.55
TCOF1-210ENST00000506767 AAGABQ6PD74 315 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 Q6ZPB1 254 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-210ENST00000506767 CCDC121Q6ZUS5 278 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 LACC1Q8IV20 430 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 LSMEM1Q8N8F7 131 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 OR4D11Q8NGI4 311 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 OR5M1Q8NGP8 315 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 ABTB1Q969K4 478 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-210ENST00000506767 FAM162AQ96A26 154 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 SARAFQ96BY9 339 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 RNF145Q96MT1 663 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 SFXN2Q96NB2 322 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 TIMP4Q99727 224 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 UGT2B28Q9BY64 529 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 ADAM19Q9H013 955 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 LRMDAQ9H2I8 198 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 EXO5Q9H790 373 aa11.61□□□□□ -0.55
TCOF1-210ENST00000506767 DCAF13Q9NV06 445 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms