RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PLEKHG1Q9ULL1 1385 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 IGHV2-70DA0A0C4DH43 119 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 A0A0J9YXY3 114 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SULT2B1O00204 365 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 ZNF264O43296 627 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 ECI2O75521 394 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SCGB2A1O75556 95 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SUPT7LO94864 414 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 LALBAP00709 142 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 TNNI3P19429 210 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 NT5EP21589 574 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 PSMA2P25787 234 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 HNRNPA3P51991 378 aaKnown RBP1.85□□□□□ -2.11
GYPB-207ENST00000506679 NUP107P57740 925 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 BPIFB3P59826 476 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 KRTAP10-8P60410 259 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 HTD2P86397 168 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 EWSR1Q01844 656 aaKnown RBP eCLIP1.85□□□□□ -2.11
GYPB-207ENST00000506679 TLE4Q04727 773 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 MAPK6Q16659 721 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 ZNF630Q2M218 657 aaPredicted RBP1.85□□□□□ -2.11
GYPB-207ENST00000506679 ZNF658BQ4V348 819 aaPredicted RBP1.85□□□□□ -2.11
GYPB-207ENST00000506679 RABGAP1LQ5R372 815 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 FAM220AQ7Z4H9 259 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SVOPLQ8N434 492 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 FADS6Q8N9I5 356 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 OR52I1Q8NGK6 324 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 NEIL3Q8TAT5 605 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 PAQR8Q8TEZ7 354 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 ANKRD49Q8WVL7 239 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 MYLPFQ96A32 169 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 ARHGDIGQ99819 225 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SLC6A7Q99884 636 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 KLHDC3Q9BQ90 382 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 GSDMCQ9BYG8 508 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 APMAPQ9HDC9 416 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SH2D2AQ9NP31 389 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 WARS2Q9UGM6 360 aaKnown RBP1.85□□□□□ -2.11
GYPB-207ENST00000506679 MFHAS1Q9Y4C4 1052 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 FRMPD4Q14CM0 1322 aa1.85□□□□□ -2.11
GYPB-207ENST00000506679 SCN2AQ99250 2005 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 ATP10DQ9P241 1426 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MTCL1Q9Y4B5 1905 aaKnown RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 IGKV6D-21A0A0A0MT36 114 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 A0A1W2PNV4 684 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 GSAPA4D1B5 854 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 USP27XA6NNY8 438 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 TRIM49D1C9J1S8 452 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 FCN1O00602 326 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MSH4O15457 936 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 TRAF3IP2O43734 574 aaPredicted RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 NPIPB7O75200 414 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 UGT2B17O75795 530 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 NEBLO76041 1014 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 SLITRK3O94933 977 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MBD3O95983 291 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 RBMXP38159 391 aaKnown RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 CTRLP40313 264 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 CD86P42081 329 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MECOMQ03112 1051 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 ATF7IP2Q5U623 682 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 Q6P435 159 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 GRAMD2AQ8IUY3 354 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MKXQ8IYA7 352 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 TMEM252Q8N6L7 170 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 ZNF433Q8N7K0 673 aaPredicted RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 C20orf203Q8NBC4 194 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 SRSF12Q8WXF0 261 aaKnown RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 FAM104AQ969W3 186 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 C4orf36Q96KX1 117 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 EBF4Q9BQW3 602 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 CRNKL1Q9BZJ0 848 aaKnown RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 NXF3Q9H4D5 531 aaKnown RBP1.84□□□□□ -2.11
GYPB-207ENST00000506679 ZNF385DQ9H6B1 395 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MEAF6Q9HAF1 191 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 MMP26Q9NRE1 261 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 PRO0461Q9UI25 63 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 CHMP2BQ9UQN3 213 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 RASD1Q9Y272 281 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 PLLPQ9Y342 182 aa1.84□□□□□ -2.11
GYPB-207ENST00000506679 A0A0G2JRQ6 117 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 KRTAP4-16G5E9R7 235 aaPredicted RBP1.83□□□□□ -2.12
GYPB-207ENST00000506679 ABCD4O14678 606 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 ZSCAN12O43309 604 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 PRKYO43930 277 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 HCN1O60741 890 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 GNA14O95837 355 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 AK1P00568 194 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 CA1P00915 261 aaPredicted RBP1.83□□□□□ -2.12
GYPB-207ENST00000506679 CSF2P04141 144 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 ASNSP08243 561 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 H2BFMP0C1H6 154 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 CALCBP10092 127 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 PSG2P11465 335 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 RNH1P13489 461 aaKnown RBP1.83□□□□□ -2.12
GYPB-207ENST00000506679 HTR1EP28566 365 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 ADSSP30520 456 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 HPDP32754 393 aaPredicted RBP1.83□□□□□ -2.12
GYPB-207ENST00000506679 EPHX2P34913 555 aa1.83□□□□□ -2.12
GYPB-207ENST00000506679 UGT1A5P35504 534 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms