RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FOXJ3Q9UPW0 622 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 CSAG2Q9Y5P2 127 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 ZNF532Q9HCE3 1301 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TPRP12270 2363 aaKnown RBP4.62□□□□□ -1.67
HERC4-213ENST00000506515 MYH8P13535 1937 aa4.62□□□□□ -1.67
HERC4-213ENST00000506515 TECTAO75443 2155 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 GON4LQ3T8J9 2241 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 A0A0U1RQV5 110 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 CCT8L1PA6NM43 557 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 F8WDY8 70 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 ALOX15BO15296 676 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 ZNF253O75346 499 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 PIGRP01833 764 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 PVRP15151 417 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 BCL3P20749 454 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 CSRP3P50461 194 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 IST1P53990 364 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 PRKCEQ02156 737 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 CNTN2Q02246 1040 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 EXOSC2Q13868 293 aaKnown RBP4.61□□□□□ -1.67
HERC4-213ENST00000506515 LTB4RQ15722 352 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 SLC22A6Q4U2R8 563 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 EIPR1Q53HC9 387 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 FBXL22Q6P050 247 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 NET1Q7Z628 596 aaPredicted RBP4.61□□□□□ -1.67
HERC4-213ENST00000506515 CCDC36Q8IYA8 594 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 TADA1Q96BN2 335 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 ZBED6CLQ96FA7 236 aaPredicted RBP4.61□□□□□ -1.67
HERC4-213ENST00000506515 PIWIL1Q96J94 861 aaKnown RBP4.61□□□□□ -1.67
HERC4-213ENST00000506515 TIGARQ9NQ88 270 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 CUTCQ9NTM9 273 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 C1orf123Q9NWV4 160 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 ZNF581Q9P0T4 197 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 ATP6V1HQ9UI12 483 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 MCM3APO60318 1980 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 MYO10Q9HD67 2058 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 WDR87Q6ZQQ6 2873 aa4.61□□□□□ -1.67
HERC4-213ENST00000506515 COL11A1P12107 1806 aaPredicted RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 TET1Q8NFU7 2136 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 MYO7AQ13402 2215 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 RNF222A6NCQ9 220 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 TRIM49BA6NDI0 452 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SAP18O00422 153 aaKnown RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 SRPX2O60687 465 aaPredicted RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 KBTBD11O94819 623 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 DIRAS3O95661 229 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 IFNB1P01574 187 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 MMP1P03956 469 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 CYP2F1P24903 491 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 IL9RQ01113 521 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 PDZK1IP1Q13113 114 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SCGB2A2Q13296 93 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SLC10A1Q14973 349 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 RAB35Q15286 201 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 ZIC1Q15915 447 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 PPP1R3AQ16821 1122 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 HSP90AA5PQ58FG0 334 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 LEG1Q6P5S2 330 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SLC39A4Q6P5W5 647 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 ARSKQ6UWY0 536 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 HACD2Q6Y1H2 254 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 TMEM184AQ6ZMB5 413 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 FBXO16Q8IX29 292 aaPredicted RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 NFAM1Q8NET5 270 aaPredicted RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 PPTC7Q8NI37 304 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SDR42E1Q8WUS8 393 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 RSPH1Q8WYR4 309 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 ART4Q93070 314 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 PINX1Q96BK5 328 aaKnown RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 DYNLL2Q96FJ2 89 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 WBP1Q96G27 269 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 C16orf45Q96MC5 204 aaPredicted RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 LIN28AQ9H9Z2 209 aaKnown RBP4.6□□□□□ -1.67
HERC4-213ENST00000506515 CLEC5AQ9NY25 188 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 RNF115Q9Y4L5 304 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 CHD8Q9HCK8 2581 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 ASTN1O14525 1302 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 A0A0G2JMZ2 1700 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SIP14410 1827 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 SCN10AQ9Y5Y9 1956 aa4.6□□□□□ -1.67
HERC4-213ENST00000506515 IGKV3D-20A0A0C4DH25 116 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 ZNF840PA6NDX5 716 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 FBLL1A6NHQ2 334 aaKnown RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 K7EPI3 171 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 M0QZ92 97 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 CASKO14936 926 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 LANCL1O43813 399 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 GPRIN2O60269 458 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 RHBDL1O75783 438 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 HSPD1P10809 573 aaKnown RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 NCF1P14598 390 aaPredicted RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 TDO2P48775 406 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 STK19P49842 368 aaPredicted RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 DEFB103AP81534 67 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 SLC1A5Q15758 541 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 SLX4IPQ5VYV7 408 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 MICAL3Q7RTP6 2002 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 SERINC5Q86VE9 423 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms