RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SHHQ15465 462 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 DMKNQ6E0U4 476 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 SLC25A25Q6KCM7 469 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 MBOAT2Q6ZWT7 520 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 RAB11FIP2Q7L804 512 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 XAGE5Q8WWM1 108 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 ZCCHC2Q9C0B9 1178 aaKnown RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 OR10A4Q9H209 315 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 EPHX3Q9H6B9 360 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 SLC6A20Q9NP91 592 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 KLHL28Q9NXS3 571 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 MLXQ9UH92 298 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 OPN4Q9UHM6 478 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 ADAM29Q9UKF5 820 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 RCE1Q9Y256 329 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 PCDHGA9Q9Y5G4 932 aaKnown RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 DOCK6Q96HP0 2047 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 NUP210Q8TEM1 1887 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 PRAMEF27A3QJZ7 478 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 DVL2O14641 736 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 NUPL2O15504 423 aaKnown RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 B4GALT2O60909 372 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 KHDRBS3O75525 346 aaKnown RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 NDUFB6O95139 128 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 EPPINO95925 133 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 IFNA4P05014 189 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 BUD31P41223 144 aaPredicted RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 GATMP50440 423 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 GPR68Q15743 365 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 DGLUCYQ7Z3D6 616 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 CPOQ8IVL8 374 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 FCAMRQ8WWV6 532 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 THAP4Q8WY91 577 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 PGLYRP3Q96LB9 341 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 C10orf90Q96M02 699 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 TIMP4Q99727 224 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 GPR62Q9BZJ7 368 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 RHBGQ9H310 441 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 CNIH4Q9P003 139 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 NOSIPQ9Y314 301 aaKnown RBP14.78□□□□□ -0.04
SCLT1-208ENST00000506368 CKAP5Q14008 2032 aa14.78□□□□□ -0.04
SCLT1-208ENST00000506368 ANKRD20A5PA0PJZ0 165 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 ARPC5O15511 151 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 OR5F1O95221 314 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 PLATP00750 562 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 ATF1P18846 271 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 FAUP35544 74 aaKnown RBP14.77□□□□□ -0.04
SCLT1-208ENST00000506368 POU4F2Q12837 409 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 ILF3Q12906 894 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCLT1-208ENST00000506368 PRAMEF13Q5VWM6 474 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 SFRP4Q6FHJ7 346 aaPredicted RBP14.77□□□□□ -0.04
SCLT1-208ENST00000506368 OR5M10Q6IEU7 315 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 COMTD1Q86VU5 262 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 OR9A1PQ8NGU1 263 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 C1QTNF2Q9BXJ5 285 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 B4GALT6Q9UBX8 382 aa14.77□□□□□ -0.04
SCLT1-208ENST00000506368 TRAPPC13A5PLN9 417 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 SOCS6O14544 535 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 TSPAN6O43657 245 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 CH25HO95992 272 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 GCGRP47871 477 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 PLD1Q13393 1074 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 IER5LQ5T953 404 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 PRPF38BQ5VTL8 546 aaKnown RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 KHDRBS2Q5VWX1 349 aaKnown RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 ZNF660Q6AZW8 331 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 FAM109BQ6ICB4 259 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 LCTLQ6UWM7 567 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 LINGO2Q7L985 606 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 BMPERQ8N8U9 685 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 BBS1Q8NFJ9 593 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 OR52L1Q8NGH7 329 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 ZNF671Q8TAW3 534 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 NSMAFQ92636 917 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 PITHD1Q9GZP4 211 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 RSPH9Q9H1X1 276 aaPredicted RBP14.77□□□□□ -0.05
SCLT1-208ENST00000506368 BEX1Q9HBH7 125 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 CA10Q9NS85 328 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 TRPC4Q9UBN4 977 aa14.77□□□□□ -0.05
SCLT1-208ENST00000506368 NINQ8N4C6 2090 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 PLXNA2O75051 1894 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 ANAPC1Q9H1A4 1944 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 TCRBV16S1A1N1A0A5B0 115 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 POP4O95707 220 aaKnown RBP14.76□□□□□ -0.05
SCLT1-208ENST00000506368 RAB40ALP0C0E4 278 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 MGMTP16455 207 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 POU3F2P20265 443 aaPredicted RBP14.76□□□□□ -0.05
SCLT1-208ENST00000506368 AGTR1P30556 359 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 RAD52P43351 418 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 LSM11P83369 360 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCLT1-208ENST00000506368 MAT1AQ00266 395 aaKnown RBP14.76□□□□□ -0.05
SCLT1-208ENST00000506368 MC2RQ01718 297 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 MICBQ29980 383 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 NUDT13Q86X67 352 aa14.76□□□□□ -0.05
SCLT1-208ENST00000506368 DNAAF1Q8NEP3 725 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms