RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TREX2Q9BQ50 279 aaPredicted RBP16.04■□□□□ 0.16
SMN1-204ENST00000506163 RLIMQ9NVW2 624 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 KLHL14Q9P2G3 628 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 P2RX2Q9UBL9 471 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 LEF1Q9UJU2 399 aaPredicted RBP16.04■□□□□ 0.16
SMN1-204ENST00000506163 CHST2Q9Y4C5 530 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 RCBTB2O95199 551 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 SNRPB2P08579 225 aaKnown RBP16.03■□□□□ 0.16
SMN1-204ENST00000506163 GPX2P18283 190 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 CCR4P51679 360 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 HPCAP84074 193 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 KLF10Q13118 480 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 SELPLGQ14242 412 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 ADRM1Q16186 407 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 SLC25A53Q5H9E4 307 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 VRK2Q86Y07 508 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 TSPEARQ8WU66 669 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 CPPED1Q9BRF8 314 aaPredicted RBP16.03■□□□□ 0.16
SMN1-204ENST00000506163 PINK1Q9BXM7 581 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 A4GALTQ9NPC4 353 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 CHST11Q9NPF2 352 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 KCNJ16Q9NPI9 418 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.03■□□□□ 0.16
SMN1-204ENST00000506163 DNAJB12Q9NXW2 375 aaKnown RBP16.03■□□□□ 0.16
SMN1-204ENST00000506163 SLC35A3Q9Y2D2 325 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 GPC6Q9Y625 555 aaPredicted RBP16.03■□□□□ 0.16
SMN1-204ENST00000506163 NOTCH2Q04721 2471 aa16.03■□□□□ 0.16
SMN1-204ENST00000506163 EIF1AYO14602 144 aaKnown RBP16.02■□□□□ 0.16
SMN1-204ENST00000506163 ADAMDEC1O15204 470 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 AQP8O94778 261 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 PRF1P14222 555 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 IGFBP2P18065 325 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 BMP5P22003 454 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 ADH6P28332 368 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.16
SMN1-204ENST00000506163 SLC6A8P48029 635 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 SEC24CP53992 1094 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 SESN3P58005 492 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 FADDQ13158 208 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 CBFBQ13951 182 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 GRAMD2AQ8IUY3 354 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 LILRA2Q8N149 483 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 TOR1AIP2Q8NFQ8 470 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 OR10D3Q8NH80 312 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 FNDC9Q8TBE3 224 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 INTS12Q96CB8 462 aaKnown RBP16.02■□□□□ 0.16
SMN1-204ENST00000506163 ENKD1Q9H0I2 346 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 DCHS2Q6V1P9 2916 aa16.02■□□□□ 0.16
SMN1-204ENST00000506163 FAM47E-STBD1D6RA91 191 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 AP3D1O14617 1153 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 TNFSF11O14788 317 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 NID1P14543 1247 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 CTSSP25774 331 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 RYKP34925 604 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 CRISP3P54108 245 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 DLX5P56178 289 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 MRPL2Q5T653 305 aaKnown RBP16.02■□□□□ 0.15
SMN1-204ENST00000506163 ZNF836Q6ZNA1 936 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 DHDDSQ86SQ9 333 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 CLIP4Q8N3C7 705 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 OR52P1PQ8NH57 321 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 PMM1Q92871 262 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 MRGPRX4Q96LA9 322 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 CGREF1Q99674 301 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 ACER3Q9NUN7 267 aa16.02■□□□□ 0.15
SMN1-204ENST00000506163 ZNF629Q9UEG4 869 aaPredicted RBP16.02■□□□□ 0.15
SMN1-204ENST00000506163 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.02■□□□□ 0.15
SMN1-204ENST00000506163 NAV2Q8IVL1 2488 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 SLC22A20A6NK97 555 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 ANGPT2O15123 496 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 PGM3O95394 542 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 DBIP07108 87 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 TMIGD3P0DMS9 266 aaPredicted RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 ARAFP10398 606 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 IL7RP16871 459 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 SFTPDP35247 375 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 EIF1AXP47813 144 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 EEFSECP57772 596 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 EEF1A1P68104 462 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 PON3Q15166 354 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 SLC25A35Q3KQZ1 300 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 TMEM176BQ3YBM2 270 aaPredicted RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 ATP6V1C2Q8NEY4 427 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 NFKBIDQ8NI38 313 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 ANKRD27Q96NW4 1050 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 TM9SF2Q99805 663 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 RAD21L1Q9H4I0 556 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 BCL2L10Q9HD36 194 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 EXOSC3Q9NQT5 275 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 THUMPD1Q9NXG2 353 aaKnown RBP16.01■□□□□ 0.15
SMN1-204ENST00000506163 ARMCX1Q9P291 453 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 FBN2P35556 2912 aa16.01■□□□□ 0.15
SMN1-204ENST00000506163 A0A0G2JPF8 293 aa16■□□□□ 0.15
SMN1-204ENST00000506163 CDHR4A6H8M9 788 aa16■□□□□ 0.15
SMN1-204ENST00000506163 HNRNPCL2B2RXH8 293 aa16■□□□□ 0.15
SMN1-204ENST00000506163 HNRNPCL3B7ZW38 293 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms