RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CBLN3Q6UW01 205 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 GALNT5Q7Z7M9 940 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 SLC43A2Q8N370 569 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.3□□□□□ -1.24
SNF8-204ENST00000506104 ADAMTS15Q8TE58 950 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 L3HYPDHQ96EM0 354 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 C11orf24Q96F05 449 aaPredicted RBP7.3□□□□□ -1.24
SNF8-204ENST00000506104 TNFRSF13CQ96RJ3 184 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 BTBD2Q9BX70 525 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 QRSL1Q9H0R6 528 aaKnown RBP7.3□□□□□ -1.24
SNF8-204ENST00000506104 TSPYL1Q9H0U9 437 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 REEP4Q9H6H4 257 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 ANKZF1Q9H8Y5 726 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 CBLN4Q9NTU7 201 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 C1orf109Q9NX04 203 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 TAS2R7Q9NYW3 318 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 KCNS2Q9ULS6 477 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 MALRD1Q5VYJ5 2156 aa7.3□□□□□ -1.24
SNF8-204ENST00000506104 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
SNF8-204ENST00000506104 DNHD1Q96M86 4753 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 C7orf72A4D263 438 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 E7EQL1 145 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 SULT2B1O00204 365 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 EFNA2O43921 213 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 LMX1BO60663 402 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 CHEK2O96017 543 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 HMGN2P05204 90 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 LINGO3P0C6S8 592 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 DHRS4L1P0CG22 281 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 SLC25A16P16260 332 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 DDX5P17844 614 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 CDH2P19022 906 aaPredicted RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 VAMP1P23763 118 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 EDNRAP25101 427 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 ELK4P28324 431 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TTKP33981 857 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 HPCAL1P37235 193 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 OR3A2P47893 321 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 DSCR9P59020 149 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 ETF1P62495 437 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 MERTKQ12866 999 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 SELENBP1Q13228 472 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 QPRTQ15274 297 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 GPR68Q15743 365 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TIGD2Q4W5G0 525 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 DCST2Q5T1A1 773 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TMEM108Q6UXF1 575 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 Q6ZSR9 355 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 Q6ZT83 130 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TDRPQ86YL5 185 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 MUC15Q8N387 334 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TOR1AIP2Q8NFQ8 470 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 OR7A2PQ8NGA2 310 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 OR5AK3PQ8NH89 298 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 ZNF563Q8TA94 476 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 FAM76AQ8TAV0 307 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 AGR3Q8TD06 166 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 APH1AQ96BI3 265 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 CCDC126Q96EE4 140 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 FBXO17Q96EF6 278 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 ZHX1-C8orf76Q96EF9 292 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 VRK1Q99986 396 aaPredicted RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 DHRS9Q9BPW9 319 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 PSD2Q9BQI7 771 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 TRMOQ9BU70 441 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 THUMPD3Q9BV44 507 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 C12orf65Q9H3J6 166 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 COQ10BQ9H8M1 238 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 SERINC1Q9NRX5 453 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 NPAP1Q9NZP6 1156 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 UPB1Q9UBR1 384 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 LPAR3Q9UBY5 353 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 DCDC2Q9UHG0 476 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 NOSIPQ9Y314 301 aaKnown RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 TRAF6Q9Y4K3 522 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 GPC6Q9Y625 555 aaPredicted RBP7.29□□□□□ -1.24
SNF8-204ENST00000506104 PMF1-BGLAPU3KQ54 211 aa7.29□□□□□ -1.24
SNF8-204ENST00000506104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.29□□□□□ -1.242e-11■■■■■ 27.1
SNF8-204ENST00000506104 VPS13CQ709C8 3753 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 A0A1W2PPM1 405 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 A0A1W2PQD3 144 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 SMAD9O15198 467 aaKnown RBP7.28□□□□□ -1.24
SNF8-204ENST00000506104 ZNF264O43296 627 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 GLRA3O75311 464 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 F12P00748 615 aaPredicted RBP7.28□□□□□ -1.24
SNF8-204ENST00000506104 NGFRP08138 427 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 UROSP10746 265 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 UBL4AP11441 157 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 BMP4P12644 408 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 PRKCAP17252 672 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 SDC1P18827 310 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 HNF1AP20823 631 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 USF1P22415 310 aaPredicted RBP7.28□□□□□ -1.24
SNF8-204ENST00000506104 RYKP34925 604 aa7.28□□□□□ -1.24
SNF8-204ENST00000506104 CCT3P49368 545 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms