RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 NXT1Q9UKK6 140 aaKnown RBP7.41□□□□□ -1.22
COL4A5-208ENST00000505728 MED31Q9Y3C7 131 aa7.41□□□□□ -1.22
COL4A5-208ENST00000505728 MPDZO75970 2070 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SPAARA0A1B0GVQ0 90 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 A0A1B0GWA3 101 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 A0A1W2PQD3 144 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 UNC119BA6NIH7 251 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SAGE2PA6NJ88 616 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF99A8MXY4 864 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 IDSB3KWA1 339 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 GTPBP1O00178 669 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SCDO00767 359 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 EIF4E2O60573 245 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 BCAS1O75363 584 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SEC14L2O76054 403 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SOX14O95416 240 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 MT-ND2P03891 347 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 HMGN1P05114 100 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 IGFBP1P08833 259 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CD63P08962 238 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 HPGDP15428 266 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SLC5A2P31639 672 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 PCYT1AP49585 367 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 NR0B1P51843 470 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CTBP2P56545 445 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 COPZ1P61923 177 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 EFNB1P98172 346 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 PLAURQ03405 335 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 EMX1Q04741 257 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 PIGFQ07326 219 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 NEDD8Q15843 81 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 NNATQ16517 81 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SMN1Q16637 294 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 FNDC7Q5VTL7 733 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 XAF1Q6GPH4 301 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 ACSM5Q6NUN0 579 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 RPL13AP3Q6NVV1 102 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 MRPL14Q6P1L8 145 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SLC27A4Q6P1M0 643 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 B3GNT6Q6ZMB0 384 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 LANCL3Q6ZV70 420 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 TMPRSS11FQ6ZWK6 438 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CPEB2Q7Z5Q1 589 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 KIF18BQ86Y91 864 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CLVS1Q8IUQ0 354 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CCDC103Q8IW40 242 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 C9orf40Q8IXQ3 194 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SLC43A2Q8N370 569 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 POGLUT1Q8NBL1 392 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 FAM71CQ8NEG0 241 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 B3GNT7Q8NFL0 401 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 OR5L2Q8NGL0 311 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 OR8K3Q8NH51 312 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 C9orf43Q8TAL5 461 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 NUBPLQ8TB37 319 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 FCGR1BQ92637 280 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 RORBQ92753 470 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 EFHD2Q96C19 240 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 VMP1Q96GC9 406 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 FAM46AQ96IP4 442 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SIGLEC11Q96RL6 698 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 GAL3ST4Q96RP7 486 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 LPAR4Q99677 370 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 COPS4Q9BT78 406 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 TSSK6Q9BXA6 273 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 YIPF3Q9GZM5 350 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 WWTR1Q9GZV5 400 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 WDR54Q9H977 334 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 MED17Q9NVC6 651 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 PAK1IP1Q9NWT1 392 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 SLC39A1Q9NY26 324 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 TVP23BQ9NYZ1 205 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 FLRT3Q9NZU0 649 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 ICAM5Q9UMF0 924 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 RPL36Q9Y3U8 105 aaKnown RBP7.4□□□□□ -1.22
COL4A5-208ENST00000505728 CDH10Q9Y6N8 788 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 COMMD3-BMI1R4GMX3 469 aa7.4□□□□□ -1.22
COL4A5-208ENST00000505728 ACACAQ13085 2346 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PCNX3Q9H6A9 2034 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SNTNA6NMZ2 147 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 ALG1L2C9J202 215 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF264O43296 627 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PIP5K1CO60331 668 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PTP4A3O75365 173 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 TRMUO75648 421 aaKnown RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PPM1BO75688 479 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 RCBTB2O95199 551 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 IGF2P01344 180 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CDK1P06493 297 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 UBL4AP11441 157 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PIPP12273 146 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CCL4P13236 92 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 IFI30P13284 250 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CD59P13987 128 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms