RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 L2HGDHQ9H9P8 463 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 BCO1Q9HAY6 547 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 HHATLQ9HCP6 504 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 MYNNQ9NPC7 610 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 GRID1Q9ULK0 1009 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 MGAT4BQ9UQ53 548 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 UTP11Q9Y3A2 253 aaKnown RBP6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 FKBP7Q9Y680 259 aa6.07□□□□□ -1.44
NPIPB3-203ENST00000504841 LRP5LA4QPB2 252 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 TTC36A6NLP5 189 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ATP6V1G2-DDX39BF2Z307 99 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 POC1B-GALNT4F8VUJ3 575 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 KIF2AO00139 706 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SMAD9O15198 467 aaKnown RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 RGS14O43566 566 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 RGS9O75916 674 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 KCNK2O95069 426 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ALOX5P09917 674 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SBK3P0C264 359 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 PRKCAP17252 672 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 EFNA1P20827 205 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ATP6V1C1P21283 382 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CFPP27918 469 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 PHBP35232 272 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 NR4A2P43354 598 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 GSTM5P46439 218 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CAV1Q03135 178 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CHRNB3Q05901 458 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SELENBP1Q13228 472 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 MLC1Q15049 377 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 TOMM34Q15785 309 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF678Q5SXM1 525 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 C9orf135Q5VTT2 229 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 FAM71E1Q6IPT2 247 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF544Q6NX49 715 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 BHLHB9Q6PI77 547 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CBLN3Q6UW01 205 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SLC46A3Q7Z3Q1 461 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 GALNT5Q7Z7M9 940 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 MISPQ8IVT2 679 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 RFLNBQ8N5W9 214 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ZNF433Q8N7K0 673 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ANKS4BQ8N8V4 417 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CDRT4Q8N9R6 151 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SLC16A11Q8NCK7 471 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ZFP28Q8NHY6 868 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 HPS1Q92902 700 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 FBXO17Q96EF6 278 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 DNAJA3Q96EY1 480 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 FOXN4Q96NZ1 517 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 MS4A4EQ96PG1 132 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SORCS2Q96PQ0 1159 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 VRK1Q99986 396 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 BPESC1Q9GZL8 116 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ADAM19Q9H013 955 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 QRSL1Q9H0R6 528 aaKnown RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 RAB17Q9H0T7 212 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ACSS3Q9H6R3 686 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 UBQLN4Q9NRR5 601 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 NTMQ9P121 344 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 ING1Q9UK53 422 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CARD8Q9Y2G2 431 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 SLC25A15Q9Y619 301 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 GPC6Q9Y625 555 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 PMF1-BGLAPU3KQ54 211 aa6.06□□□□□ -1.44
NPIPB3-203ENST00000504841 CCDC151A5D8V7 595 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 VWC2LB2RUY7 222 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 TRIM49D1C9J1S8 452 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 AKAP10O43572 662 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CYTIPO60759 359 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CRCPO75575 148 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CYP7B1O75881 506 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 PGM3O95394 542 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 H6PDO95479 791 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 ENO1P06733 434 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 NGFRP08138 427 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 TFPIP10646 304 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 TAC1P20366 129 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 MAGEA12P43365 314 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 SMCPP49901 116 aaPredicted RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 P2RX1P51575 399 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 FOXG1P55316 489 aaPredicted RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 FOXA1P55317 472 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 RAC3P60763 192 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 SNRPD2P62316 118 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 ACTG1P63261 375 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 PHC1P78364 1004 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 LCP2Q13094 533 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 LASP1Q14847 261 aaKnown RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 QPRTQ15274 297 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 ARL13AQ5H913 290 aaPredicted RBP6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 FBXW9Q5XUX1 488 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 CDC73Q6P1J9 531 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 LRIG3Q6UXM1 1119 aa6.05□□□□□ -1.44
NPIPB3-203ENST00000504841 RINLQ6ZS11 566 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms