RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EEF1A1P5Q5VTE0 462 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 C6orf120Q7Z4R8 191 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ATP6V1C2Q8NEY4 427 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 OR6K3Q8NGY3 331 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 RFWD2Q8NHY2 731 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 IGFBPL1Q8WX77 278 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 RAB8BQ92930 207 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 PERPQ96FX8 193 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
DDX41-204ENST00000504807 MED18Q9BUE0 208 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 OR51I1Q9H343 314 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 C12orf49Q9H741 205 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 NOP53Q9NZM5 478 aaKnown RBP11.7□□□□□ -0.54
DDX41-204ENST00000504807 NDRG3Q9UGV2 375 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 MKLN1Q9UL63 735 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 DTNAQ9Y4J8 743 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ACTL7BQ9Y614 415 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 RNF103-CHMP3A0A140T963 221 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 CLDN24A6NM45 220 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 ETV2O00321 342 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 RGS16O15492 202 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 KCNAB3O43448 404 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 DNAJA2O60884 412 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 GCM2O75603 506 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 GOSR1O95249 250 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 FCGR2AP12318 317 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 HPGDP15428 266 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 MATN1P21941 496 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 RPL3P39023 403 aaKnown RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 CDKN2CP42773 168 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 SLC1A6P48664 564 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 NME5P56597 212 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 BST1Q10588 318 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 QPRTQ15274 297 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 GPR68Q15743 365 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 SPANXN4Q5MJ08 99 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 CEP85LQ5SZL2 805 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 PRSS57Q6UWY2 283 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 SEZ6L2Q6UXD5 910 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 MTERF4Q7Z6M4 381 aaKnown RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 TUSC5Q8IXB3 177 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 DNAJA3Q96EY1 480 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 SSU72Q9NP77 194 aaKnown RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 FAF1Q9UNN5 650 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 EIF3LQ9Y262 564 aaKnown RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 RAP2CQ9Y3L5 183 aa11.69□□□□□ -0.54
DDX41-204ENST00000504807 NUP214P35658 2090 aaPredicted RBP11.69□□□□□ -0.54
DDX41-204ENST00000504807 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 SERINC4A6NH21 518 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 SDHDO14521 159 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 CASKO14936 926 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 BIRC5O15392 142 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 CNOT4O95628 575 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 TUBBP07437 444 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 OR12D1P0DN82 309 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 ATP6V1C1P21283 382 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 RPL14P50914 215 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 CARD18P57730 90 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 UFM1P61960 85 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 MAPK11Q15759 364 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 ZNF141Q15928 474 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 ARHGAP11BQ3KRB8 267 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 LSM12Q3MHD2 195 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 TMEM176BQ3YBM2 270 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 SAXO2Q658L1 398 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 TYW3Q6IPR3 259 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 TNFAIP8L2Q6P589 184 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 TFAP2EQ6VUC0 442 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 MAVSQ7Z434 540 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 GABRG1Q8N1C3 465 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 OR8J2Q8NGG1 315 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 OR4A15Q8NGL6 344 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 SLC35G5Q96KT7 338 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 SLC39A3Q9BRY0 314 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 INPP5KQ9BT40 448 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 THUMPD3Q9BV44 507 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 PRRG4Q9BZD6 226 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 ZNF350Q9GZX5 532 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 SLC6A13Q9NSD5 602 aa11.68□□□□□ -0.54
DDX41-204ENST00000504807 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
DDX41-204ENST00000504807 ZNF814B7Z6K7 855 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms