RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TRAPPC13A5PLN9 417 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ETV2O00321 342 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 EFSO43281 561 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ZNF264O43296 627 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 TLX3O43711 291 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 CHP2O43745 196 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 SCO2O43819 266 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 HS6ST1O60243 411 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 EIF4E2O60573 245 aaKnown RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 CCNB2O95067 398 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 GASTP01350 101 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 IGFBP5P24593 272 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 GSSP48637 474 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ST3GAL3Q11203 375 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 MERTKQ12866 999 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 TRAM2Q15035 370 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 TAF11Q15544 211 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ZIK1Q3SY52 487 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 DCST1Q5T197 706 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 C1orf94Q6P1W5 598 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 KLHL17Q6TDP4 642 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ZNF550Q7Z398 422 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ATG4DQ86TL0 474 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 RANBP3LQ86VV4 465 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 RPS19BP1Q86WX3 136 aaKnown RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 PARP8Q8N3A8 854 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 IL22RA1Q8N6P7 574 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 AQP11Q8NBQ7 271 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 PHOSPHO1Q8TCT1 267 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 PAQR8Q8TEZ7 354 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 ACOT11Q8WXI4 607 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 NXPE2Q96DL1 559 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 NPAS1Q99742 590 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 FNDC11Q9BVV2 318 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 OSBPL11Q9BXB4 747 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 GRIP2Q9C0E4 1043 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 MEPEQ9NQ76 525 aaPredicted RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 SLC13A4Q9UKG4 626 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 YARS2Q9Y2Z4 477 aaKnown RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 FAM32AQ9Y421 112 aaKnown RBP9.48□□□□□ -0.89
TPM3-217ENST00000504663 SPTBN2O15020 2390 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 A0A0G2JMM0 328 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 A0A1W2PPB8 328 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 A0A1W2PRS3 328 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 KIR3DP1A8MWS1 328 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 NKX2-8O15522 239 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 CLIC3O95833 236 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 ADAP00813 363 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 IGFBP1P08833 259 aaPredicted RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 CCL3P10147 92 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 ANXA8P13928 327 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 PTNP21246 168 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 KRT20P35900 424 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 CAPGP40121 348 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 CASP3P42574 277 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 HSPA13P48723 471 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 SOX8P57073 446 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FXYD6P3P58550 94 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FOXC1Q12948 553 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FHL1Q13642 323 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 INPP5JQ15735 1006 aaPredicted RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 CD300LDQ6UXZ3 194 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 Q6ZPB1 254 aaPredicted RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 MBOAT2Q6ZWT7 520 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 PRICKLE2Q7Z3G6 844 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 MEX3DQ86XN8 651 aaKnown RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 KIF18BQ86Y91 864 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 SIRT6Q8N6T7 355 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FADS6Q8N9I5 356 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 TOR1AIP2Q8NFQ8 470 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 OR5M3Q8NGP4 307 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 PFN4Q8NHR9 129 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 SH3YL1Q96HL8 342 aaPredicted RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 TRIM2Q9C040 744 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 ADAM19Q9H013 955 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 VCXQ9H320 206 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 ARMC7Q9H6L4 198 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
TPM3-217ENST00000504663 C20orf141Q9NUB4 165 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 FAM118AQ9NWS6 357 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 LRCH1Q9Y2L9 728 aa9.47□□□□□ -0.89
TPM3-217ENST00000504663 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.89
TPM3-217ENST00000504663 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.89
TPM3-217ENST00000504663 H0YAE9 185 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 CDC42EP2O14613 210 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 SLC16A6O15403 523 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 NDUFB5O43674 189 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 ICAM2P13598 275 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 MAKP20794 623 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 MYF6P23409 242 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 RYKP34925 604 aa9.46□□□□□ -0.9
TPM3-217ENST00000504663 TMED10P49755 219 aaKnown RBP9.46□□□□□ -0.9
TPM3-217ENST00000504663 SSR4P51571 173 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms