RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FAM227AF5H4B4 570 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ADRB2P07550 413 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 C1GALT1C1LP0DN25 315 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 PTGER4P35408 488 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 RBM11P57052 281 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 WDR4P57081 412 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 RPS13P62277 151 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SUMO1P63165 101 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 BRICD5Q6PL45 260 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 MPZL3Q6UWV2 235 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 AMZ2Q86W34 360 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 APOBEC3FQ8IUX4 373 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 BAP18Q8IXM2 172 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 OR52E5Q8NH55 327 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 CPXM1Q96SM3 734 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 TRMT61BQ9BVS5 477 aaKnown RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ACTRT3Q9BYD9 372 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ENKD1Q9H0I2 346 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 PIGMQ9H3S5 423 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ADAMTS13Q76LX8 1427 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TCAF2A6NFQ2 919 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 H3BNC9 293 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TGFB1I1O43294 461 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ITGA10O75578 1167 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ITGA4P13612 1032 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 POU3F3P20264 500 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 BMP6P22004 513 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 F2RP25116 425 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SNCAP37840 140 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CD200P41217 278 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SLC6A12P48065 614 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GZMKP49863 264 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 DUSP8Q13202 625 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PNLIPRP3Q17RR3 467 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SLC36A2Q495M3 483 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SFRP5Q5T4F7 317 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM268Q5VZI3 342 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR2T2Q6IF00 324 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MFSD5Q6N075 450 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GPAT4Q86UL3 456 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 LRRC28Q86X40 367 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM139Q8IV31 216 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM192Q8IY95 271 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CISD2Q8N5K1 135 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF610Q8N9Z0 462 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR6N2Q8NGY6 317 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR6F1Q8NGZ6 308 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 RAB1CQ92928 201 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF512Q96ME7 567 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TAS2R14Q9NYV8 317 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ABI3Q9P2A4 366 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CD84Q9UIB8 345 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MFSD11O43934 449 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TYMSP04818 313 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SPNP16150 400 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PPP3CAQ08209 521 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CRHR2Q13324 411 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CHSY1Q86X52 802 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR1J4Q8NGS1 313 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 RPUSD4Q96CM3 377 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SAMD10Q9BYL1 202 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MIXL1Q9H2W2 232 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 EQTNQ9NQ60 294 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CBLN4Q9NTU7 201 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FAM217BQ9NTX9 383 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 NLKQ9UBE8 527 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MYOTQ9UBF9 498 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 DHCR7Q9UBM7 475 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MST1RQ04912 1400 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 DDNO94850 711 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GLCEO94923 617 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CDRT1O95170 752 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 RPA3P35244 121 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GALCP54803 685 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 UBA52P62987 128 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SPP2Q13103 211 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TTLL4Q14679 1199 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM183BQ1AE95 376 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF605Q86T29 641 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 C1orf87Q8N0U7 546 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 C15orf54Q8N8G6 183 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 LNX1Q8TBB1 728 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PIGBQ92521 554 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM18Q96B42 140 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PDXPQ96GD0 296 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR5B12Q96R08 314 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SPSB2Q99619 263 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SYT17Q9BSW7 474 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SYT11Q9BT88 431 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ALG12Q9BV10 488 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MECRQ9BV79 373 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 HDAC8Q9BY41 377 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CSTL1Q9H114 145 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 XYLT2Q9H1B5 865 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 WBP1LQ9NX94 342 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FLRT1Q9NZU1 646 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms