RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 OR56B2PQ8NGI1 322 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR5D13Q8NGL4 314 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR1F12Q8NHA8 337 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 AENQ8WTP8 325 aaKnown RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 IL1F10Q8WWZ1 152 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 NT5C3BQ969T7 300 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 PIWIL1Q96J94 861 aaKnown RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC39A3Q9BRY0 314 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 VPS33BQ9H267 617 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 FANCFQ9NPI8 374 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 EXOSC3Q9NQT5 275 aaKnown RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF221Q9UK13 617 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 PNPLA6Q8IY17 1366 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 C1orf167Q5SNV9 1468 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 FRMPD4Q14CM0 1322 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 FMN2Q9NZ56 1722 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 BRWD3Q6RI45 1802 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF487B1APH4 448 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 H7C423 109 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 MSH4O15457 936 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 N4BP1O75113 896 aaKnown RBP4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 H2BFMP0C1H6 154 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 PCMT1P22061 227 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 GDI1P31150 447 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 ACTR3P61158 418 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 ERVK11-1P61568 191 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 RPL8P62917 257 aaKnown RBP4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 RIPPLY1Q0D2K3 151 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 COX10Q12887 443 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 CYLC2Q14093 348 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC5A12Q1EHB4 618 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAAP20Q6NZ36 180 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 DOK6Q6PKX4 331 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 MOB3BQ86TA1 216 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 LINC01561Q8N1V8 128 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 C15orf54Q8N8G6 183 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR10A7Q8NGE5 316 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR4Q3Q8NH05 313 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 TPD52L3Q96J77 140 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 C18orf12Q96KH6 178 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 TUBGCP2Q9BSJ2 902 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 HEXA-AS1Q9H8Q6 139 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 PANK3Q9H999 370 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 EHFQ9NZC4 300 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 ALG6Q9Y672 507 aa4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 COL22A1Q8NFW1 1626 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P3-201ENST00000502802 SPATA31E1Q6ZUB1 1445 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 HELTA6NFD8 242 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 LRRTM2O43300 516 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 FCMRO60667 390 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 SRPX2O60687 465 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 LRATO95237 230 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 SERPINA3P01011 423 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 SERPINB2P05120 415 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 MELTFP08582 738 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 PNMTP11086 282 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 P2RY1P47900 373 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ARHGDIBP52566 201 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ATP5IP56385 69 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 RND3P61587 244 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 RPL23AP62750 156 aaKnown RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 PAX8Q06710 450 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 PUDPQ08623 228 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF154Q13106 437 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 PEX6Q13608 980 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 MICAQ29983 383 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 PHYHD1Q5SRE7 291 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAM120AOSQ5T036 256 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF772Q68DY9 489 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ADAM5Q6NVV9 412 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAHD2BQ6P2I3 314 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 CCDC80Q76M96 950 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 NBPF5PQ86XG9 351 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 CSNK1G2-AS1Q8NCQ2 148 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF671Q8TAW3 534 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 BADQ92934 168 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAHD2AQ96GK7 314 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 NPY6RQ99463 290 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 HCAR1Q9BXC0 346 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 KRTAP4-5Q9BYR2 181 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 NXF5Q9H1B4 397 aaKnown RBP4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC17A5Q9NRA2 495 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 OARD1Q9Y530 152 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 CDC42BPGQ6DT37 1551 aa4.23□□□□□ -1.73
HMGB1P3-201ENST00000502802 A0A0U1RQS6 177 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 SAGE2PA6NJ88 616 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 G3V4G9 280 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 ALPIP09923 528 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 H2AFZP0C0S5 128 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 HSMCR30P0CW71 290 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 ACVR1BP36896 505 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR1D4P47884 311 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 RAB40BQ12829 278 aa4.22□□□□□ -1.73
HMGB1P3-201ENST00000502802 CRMP1Q14194 572 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms