RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SNRPB2	P08579	225 aa	Known RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	TROVE2	P10155	538 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	IL7R	P16871	459 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	PRKCA	P17252	672 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	NCF2	P19878	526 aa	Predicted RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	UQCRC1	P31930	480 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	EIF1AX	P47813	144 aa	Known RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	PCYT1A	P49585	367 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	CRISP3	P54108	245 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	CLDN20	P56880	219 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	DSTN	P60981	165 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	KCNJ10	P78508	379 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	SORD	Q00796	357 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	CHRNE	Q04844	493 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	FADD	Q13158	208 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	SELENBP1	Q13228	472 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	SKP2	Q13309	424 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	PON3	Q15166	354 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC25A53	Q5H9E4	307 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	POMZP3	Q6PJE2	187 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	FRRS1	Q6ZNA5	592 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	PEX5L	Q8IYB4	626 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	LILRA2	Q8N149	483 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	RELL2	Q8NC24	303 aa	Predicted RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	OR2V1	Q8NHB1	315 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	RFWD2	Q8NHY2	731 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	FBXO27	Q8NI29	283 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	REXO5	Q96IC2	774 aa	Known RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	KLHL15	Q96M94	604 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	TRIM8	Q9BZR9	551 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	ARMC7	Q9H6L4	198 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	RNF122	Q9H9V4	155 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	NPHS2	Q9NP85	383 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	GLRX2	Q9NS18	164 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF446	Q9NWS9	450 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	JKAMP	Q9P055	326 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF232	Q9UNY5	417 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	CORO2B	Q9UQ03	480 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	L3MBTL1	Q9Y468	752 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	PCDHB14	Q9Y5E9	798 aa		9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	SPIN1	Q9Y657	262 aa	Predicted RBP	9.46	□□□□□ -0.9
FXR1-222	ENST00000498658	UQCRHL	A0A096LP55	91 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658		A0A0G2JPF8	293 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658		A0A1W2PP18	115 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HNRNPCL2	B2RXH8	293 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HNRNPCL3	B7ZW38	293 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CLIC1	O00299	241 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	ETV2	O00321	342 aa	Predicted RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	NR5A2	O00482	541 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	MSTN	O14793	375 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HNRNPCL1	O60812	293 aa	Known RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	PLG	P00747	810 aa	Predicted RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	UBTFL6	P0CB48	400 aa	Predicted RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HNRNPCL4	P0DMR1	293 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CAPN3	P20807	821 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC7A1	P30825	629 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	PGM1	P36871	562 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	APOBEC1	P41238	236 aa	Known RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	KIR2DL3	P43628	341 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HTR3A	P46098	478 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CPA2	P48052	419 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CARD18	P57730	90 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FUT5	Q11128	374 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FOXF1	Q12946	379 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FOXF2	Q12947	444 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	QPRT	Q15274	297 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	SYPL1	Q16563	259 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	AGK	Q53H12	422 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	COX20	Q5RI15	118 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	LRIF1	Q5T3J3	769 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	PRAMEF8	Q5VWM4	474 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	PRAMEF7	Q5VXH5	474 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	HBM	Q6B0K9	141 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC2A7	Q6PXP3	512 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FUNDC1	Q8IVP5	155 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF440	Q8IYI8	595 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CNEP1R1	Q8N9A8	125 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FAM71C	Q8NEG0	241 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	OR10D3	Q8NH80	312 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF563	Q8TA94	476 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FNDC9	Q8TBE3	224 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	POC1B	Q8TC44	478 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	PNPT1	Q8TCS8	783 aa	Known RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	TSPEAR	Q8WU66	669 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	FIG4	Q92562	907 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	CPNE4	Q96A23	557 aa	Predicted RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF559	Q9BR84	538 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	THUMPD3	Q9BV44	507 aa	Known RBP	9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC38A1	Q9H2H9	487 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	KCNE5	Q9UJ90	142 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	DCTN4	Q9UJW0	460 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	GMEB1	Q9Y692	573 aa		9.45	□□□□□ -0.9
FXR1-222	ENST00000498658	MED12L	Q86YW9	2145 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658		A0A0G2JND7	137 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658		A0A1W2PNV4	684 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	PRAMEF27	A3QJZ7	478 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658		A8MXE2	369 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	EVPLL	A8MZ36	301 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	SHISA8	B8ZZ34	492 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms