RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 M0R1B8 84 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 KIAA0513O60268 411 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 CYTIPO60759 359 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ATP5F1P24539 256 aaPredicted RBP12.27□□□□□ -0.45
CCDC58-207ENST00000498466 P2RX1P51575 399 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 FOXA1P55317 472 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 CHRNB3Q05901 458 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 SELENBP1Q13228 472 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 TOMM34Q15785 309 aaPredicted RBP12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF544Q6NX49 715 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 LRIG3Q6UXM1 1119 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 MTERF4Q7Z6M4 381 aaKnown RBP12.27□□□□□ -0.45
CCDC58-207ENST00000498466 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 UBE2J2Q8N2K1 259 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF527Q8NB42 609 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 C3orf49Q96BT1 292 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 MSI2Q96DH6 328 aaKnown RBP12.27□□□□□ -0.45
CCDC58-207ENST00000498466 C16orf58Q96GQ5 468 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 INPP5KQ9BT40 448 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 FUT8Q9BYC5 575 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ZDHHC18Q9NUE0 388 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 GIN1Q9NXP7 522 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 TMEM216Q9P0N5 145 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ATP23Q9Y6H3 246 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 PMF1-BGLAPU3KQ54 211 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 ALPK2Q86TB3 2170 aa12.27□□□□□ -0.45
CCDC58-207ENST00000498466 A0A1W2PR80 420 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF724A8MTY0 619 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 H3BNH8 94 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 GTPBP1O00178 669 aaKnown RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 SMAD9O15198 467 aaKnown RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 OIP5O43482 229 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 RSL1D1O76021 490 aaKnown RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 HSPA4LO95757 839 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 IGHV3-9P01782 118 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 PRKCAP17252 672 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ATP6V1C1P21283 382 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 PDLIM4P50479 330 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 PRKAA2P54646 552 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 SUMO3P55854 103 aaPredicted RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 POU6F2P78424 691 aaPredicted RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ZCCHC12Q6PEW1 402 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 SLC22A9Q8IVM8 553 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 RFWD2Q8NHY2 731 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 GPR119Q8TDV5 335 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 DCAKDQ8WVC6 231 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF75CPQ92670 426 aaPredicted RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 L3HYPDHQ96EM0 354 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 MRGPRX4Q96LA9 322 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 OR5B2Q96R09 309 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 PIMREGQ9BSJ6 248 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 BTBD2Q9BX70 525 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 CDC42EP4Q9H3Q1 356 aaKnown RBP12.26□□□□□ -0.45
CCDC58-207ENST00000498466 NTMQ9P121 344 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF180Q9UJW8 692 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ICAM5Q9UMF0 924 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 ACTL7BQ9Y614 415 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 SLC25A15Q9Y619 301 aa12.26□□□□□ -0.45
CCDC58-207ENST00000498466 FREM1Q5H8C1 2179 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 NPIPA5A0A0B4J1W7 369 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 NPIPA7E9PJI5 369 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 TCF21O43680 179 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 CRCPO75575 148 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 TGFAP01135 160 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 SNRPAP09012 282 aaKnown RBP12.25□□□□□ -0.45
CCDC58-207ENST00000498466 NPIPA8P0DM63 369 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 NR4A2P43354 598 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 CARTPTQ16568 116 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 NDUFAF6Q330K2 333 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 ZNF385BQ569K4 471 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 FBXW9Q5XUX1 488 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 TRIM46Q7Z4K8 759 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 TMCO5AQ8N6Q1 288 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 CCNYL1Q8N7R7 359 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 CDS1Q92903 461 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 ARL8AQ96BM9 186 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 PPCDCQ96CD2 204 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 PRR14Q9BWN1 585 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 C1QTNF6Q9BXI9 259 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 C12orf65Q9H3J6 166 aaKnown RBP12.25□□□□□ -0.45
CCDC58-207ENST00000498466 GSTO2Q9H4Y5 243 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 RRAGDQ9NQL2 400 aaPredicted RBP12.25□□□□□ -0.45
CCDC58-207ENST00000498466 EMC3Q9P0I2 261 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 SH3BP4Q9P0V3 963 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 FKBP7Q9Y680 259 aa12.25□□□□□ -0.45
CCDC58-207ENST00000498466 VWC2LB2RUY7 222 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 NDUFS8O00217 210 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 AKAP10O43572 662 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 SEC22BO75396 215 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 APOBEC3AP31941 199 aaPredicted RBP12.24□□□□□ -0.45
CCDC58-207ENST00000498466 YLPM1P49750 1951 aaKnown RBP12.24□□□□□ -0.45
CCDC58-207ENST00000498466 CCR4P51679 360 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 QPRTQ15274 297 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 IQCCQ4KMZ1 466 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 KLHL26Q53HC5 615 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 C3orf33Q6P1S2 294 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
CCDC58-207ENST00000498466 RFLNBQ8N5W9 214 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms