RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DNAJB12Q9NXW2 375 aaKnown RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 MAGEL2Q9UJ55 1249 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 BAG5Q9UL15 447 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 ICAM5Q9UMF0 924 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 NTNG1Q9Y2I2 539 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 HRH3Q9Y5N1 445 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 SNX13Q9Y5W8 968 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 DNAJC13O75165 2243 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 ANKUB1A6NFN9 424 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 CDC40O60508 579 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTSD-206ENST00000497544 BCAS1O75363 584 aaPredicted RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 STAMBPO95630 424 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 C8BP07358 591 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 LINGO3P0C6S8 592 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 RYKP34925 604 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 SLC6A8P48029 635 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 ZNF41P51814 821 aaPredicted RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 MLLT10P55197 1068 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 CBFBQ13951 182 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 GANABQ14697 944 aaKnown RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 CYBRD1Q53TN4 286 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 RP1L1Q8IWN7 2480 aaPredicted RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 FAM71CQ8NEG0 241 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 CPT1CQ8TCG5 803 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 LZICQ8WZA0 190 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 NR4A3Q92570 626 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 PROX1Q92786 737 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 TPD52L3Q96J77 140 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 TSPAN10Q9H1Z9 355 aaPredicted RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 UBQLN3Q9H347 655 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 EXO5Q9H790 373 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 EVA1AQ9H8M9 152 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 GORASP2Q9H8Y8 452 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 MRPS18CQ9Y3D5 142 aaKnown RBP18.19■□□□□ 0.5
CTSD-206ENST00000497544 CHST2Q9Y4C5 530 aa18.19■□□□□ 0.5
CTSD-206ENST00000497544 PDZD2O15018 2839 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ZNF407Q9C0G0 2248 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 CFAP73A6NFT4 308 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 B4DXG7 233 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 LGI1O95970 557 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 SERPINA1P01009 418 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 GKN3PP0CG01 181 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 HK1P19367 917 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 PGCP20142 388 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 GNLYP22749 145 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 SELENOWP63302 87 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ELOAQ14241 798 aaKnown RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 TRIM25Q14258 630 aaKnown RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 KRTCAP3Q53RY4 240 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 PRR30Q53SZ7 412 aaPredicted RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 C1QL3Q5VWW1 255 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 YRDCQ86U90 279 aaKnown RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 OR14L1PQ8NHC6 308 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ZNF563Q8TA94 476 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 GPR119Q8TDV5 335 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ARSGQ96EG1 525 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 C1GALT1C1Q96EU7 318 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 NSMCE2Q96MF7 247 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 RNF145Q96MT1 663 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 RSPO3Q9BXY4 272 aaPredicted RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 MMADHCQ9H3L0 296 aaPredicted RBP18.18■□□□□ 0.5
CTSD-206ENST00000497544 MUC13Q9H3R2 512 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ZDHHC11Q9H8X9 412 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 ACKR4Q9NPB9 350 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 TAS2R10Q9NYW0 307 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 RPS6KA6Q9UK32 745 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 VDAC3Q9Y277 283 aa18.18■□□□□ 0.5
CTSD-206ENST00000497544 FBN3Q75N90 2809 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 A0A087WZY1 265 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 SYT5O00445 386 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 ARPC2O15144 300 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 ZIC3O60481 467 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 ZNF682O95780 498 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 HPNP05981 417 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 FESP07332 822 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 CELA3AP09093 270 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 UQCRBP14927 111 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 CD247P20963 164 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 TCEA1P23193 301 aaKnown RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 MST1P26927 711 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 CRYBA2P53672 197 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 FXNQ16595 210 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 CMPK2Q5EBM0 449 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 WIPI1Q5MNZ9 446 aaPredicted RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 ZNF324BQ6AW86 544 aaPredicted RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 PGM2L1Q6PCE3 622 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 ARSKQ6UWY0 536 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 MAMDC2Q7Z304 686 aaPredicted RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 SIAH3Q8IW03 269 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 FAM83FQ8NEG4 500 aaPredicted RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 GPR32P1Q8NGA4 272 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 SLC35B4Q969S0 331 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 CCDC124Q96CT7 223 aaKnown RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 LRMDAQ9H2I8 198 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 MED17Q9NVC6 651 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 ACTR3BQ9P1U1 418 aa18.17■□□□□ 0.5
CTSD-206ENST00000497544 RPH3AQ9Y2J0 694 aaPredicted RBP18.17■□□□□ 0.5
CTSD-206ENST00000497544 GTF3C1Q12789 2109 aa18.16■□□□□ 0.5
CTSD-206ENST00000497544 TRGV5A0A0B4J1U4 118 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms