RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MXD4Q14582 209 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 PRR4Q16378 134 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 GGTA1PQ4G0N0 100 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 SBK1Q52WX2 424 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 BEND3Q5T5X7 828 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 CENPPQ6IPU0 288 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 KDELC1Q6UW63 502 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 DNM1P46Q6ZS02 220 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 CCDC50Q8IVM0 306 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 FAM133AQ8N9E0 248 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 OR13F1Q8NGS4 319 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 MRAPQ8TCY5 172 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 TCTEX1D2Q8WW35 142 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 ARNTL2Q8WYA1 636 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 MRPS31Q92665 395 aaKnown RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 FGGYQ96C11 551 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 NAT10Q9H0A0 1025 aaKnown RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 IKZF5Q9H5V7 419 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 SMYD3Q9H7B4 428 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 LRRC40Q9H9A6 602 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 APMAPQ9HDC9 416 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 ZNF275Q9NSD4 429 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 UFSP2Q9NUQ7 469 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 PAK1IP1Q9NWT1 392 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 SMPD3Q9NY59 655 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 OR1A1Q9P1Q5 309 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 RIMS3Q9UJD0 308 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 KLHL21Q9UJP4 597 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 USP16Q9Y5T5 823 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 NOTCH2Q04721 2471 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SYNJ2BP-COX16A0A087WUM0 186 aa3□□□□□ -1.93
SMC4-225ENST00000497203 A0A1W2PQ72 361 aa3□□□□□ -1.93
SMC4-225ENST00000497203 METTL21EPA6NDL7 271 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SULT2B1O00204 365 aa3□□□□□ -1.93
SMC4-225ENST00000497203 PHOX2AO14813 284 aa3□□□□□ -1.93
SMC4-225ENST00000497203 ARPC3O15145 178 aa3□□□□□ -1.93
SMC4-225ENST00000497203 TAPBPO15533 448 aa3□□□□□ -1.93
SMC4-225ENST00000497203 TBL1XO60907 577 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SERF1AO75920 110 aa3□□□□□ -1.93
SMC4-225ENST00000497203 CYP2B6P20813 491 aa3□□□□□ -1.93
SMC4-225ENST00000497203 EPHX2P34913 555 aa3□□□□□ -1.93
SMC4-225ENST00000497203 GCKP35557 465 aa3□□□□□ -1.93
SMC4-225ENST00000497203 KIR2DS2P43631 304 aa3□□□□□ -1.93
SMC4-225ENST00000497203 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
SMC4-225ENST00000497203 LIM2P55344 173 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SLC10A7Q0GE19 358 aa3□□□□□ -1.93
SMC4-225ENST00000497203 OR2B11Q5JQS5 317 aa3□□□□□ -1.93
SMC4-225ENST00000497203 C10orf120Q5SQS8 335 aa3□□□□□ -1.93
SMC4-225ENST00000497203 RSBN1Q5VWQ0 802 aaPredicted RBP3□□□□□ -1.93
SMC4-225ENST00000497203 WSCD1Q658N2 575 aa3□□□□□ -1.93
SMC4-225ENST00000497203 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
SMC4-225ENST00000497203 TFAP2EQ6VUC0 442 aa3□□□□□ -1.93
SMC4-225ENST00000497203 Q6ZPB1 254 aaPredicted RBP3□□□□□ -1.93
SMC4-225ENST00000497203 CCDC80Q76M96 950 aa3□□□□□ -1.93
SMC4-225ENST00000497203 MOB1BQ7L9L4 216 aa3□□□□□ -1.93
SMC4-225ENST00000497203 NLRP9Q7RTR0 991 aa3□□□□□ -1.93
SMC4-225ENST00000497203 ZBED8Q8IZ13 594 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SLC38A6Q8IZM9 456 aa3□□□□□ -1.93
SMC4-225ENST00000497203 CLEC4FQ8N1N0 589 aa3□□□□□ -1.93
SMC4-225ENST00000497203 CD177Q8N6Q3 437 aa3□□□□□ -1.93
SMC4-225ENST00000497203 OR51G2Q8NGK0 314 aa3□□□□□ -1.93
SMC4-225ENST00000497203 OR4D5Q8NGN0 318 aa3□□□□□ -1.93
SMC4-225ENST00000497203 OR2A12Q8NGT7 310 aa3□□□□□ -1.93
SMC4-225ENST00000497203 OR1F12Q8NHA8 337 aa3□□□□□ -1.93
SMC4-225ENST00000497203 PELI1Q96FA3 418 aa3□□□□□ -1.93
SMC4-225ENST00000497203 CELF6Q96J87 481 aaKnown RBP3□□□□□ -1.93
SMC4-225ENST00000497203 SERAC1Q96JX3 654 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SLC35A5Q9BS91 424 aa3□□□□□ -1.93
SMC4-225ENST00000497203 NIPSNAP3BQ9BS92 247 aa3□□□□□ -1.93
SMC4-225ENST00000497203 DEFB126Q9BYW3 111 aa3□□□□□ -1.93
SMC4-225ENST00000497203 COX16Q9P0S2 106 aa3□□□□□ -1.93
SMC4-225ENST00000497203 SCML2Q9UQR0 700 aa3□□□□□ -1.93
SMC4-225ENST00000497203 AGRNO00468 2067 aa3□□□□□ -1.93
SMC4-225ENST00000497203 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 MPHOSPH10O00566 681 aaKnown RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 CDX4O14627 284 aaPredicted RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 PRRG1O14668 218 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 HCN1O60741 890 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 SNNO75324 88 aaPredicted RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 ZNF254O75437 659 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 ECI2O75521 394 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 LALBAP00709 142 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PNMTP11086 282 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 IMPDH1P20839 514 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 VDAC1P21796 283 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 LAP3P28838 519 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 NTSP30990 170 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 SSR1P43307 286 aaKnown RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 P2RY1P47900 373 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 TDO2P48775 406 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 STARP49675 285 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 SLC26A2P50443 739 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PLK1P53350 603 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 CHRNB3Q05901 458 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 BCL2L1Q07817 233 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 KIAA0040Q15053 153 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PMF1Q6P1K2 205 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 FAM199XQ6PEV8 388 aaPredicted RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 FRA10AC1Q70Z53 315 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 KIR3DL3Q8N743 410 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms