RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PAPOLGQ9BWT3 736 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 FTHL17Q9BXU8 183 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ANKRD60Q9BZ19 345 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF385DQ9H6B1 395 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PLGRKTQ9HBL7 147 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 EML4Q9HC35 981 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 PFDN4Q9NQP4 134 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 ARMC1Q9NVT9 282 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 BFARQ9NZS9 450 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RSL24D1Q9UHA3 163 aaKnown RBP3.22□□□□□ -1.89
TRIM4-205ENST00000496896 RIMS3Q9UJD0 308 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 CDH7Q9ULB5 785 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 EMCNQ9ULC0 261 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 STAP1Q9ULZ2 295 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 AP4B1Q9Y6B7 739 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 FER1L6Q2WGJ9 1857 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 LRRC37A2A6NM11 1700 aa3.22□□□□□ -1.89
TRIM4-205ENST00000496896 COL11A1P12107 1806 aaPredicted RBP3.21□□□□□ -1.89
TRIM4-205ENST00000496896 ZNF236Q9UL36 1845 aa3.21□□□□□ -1.89
TRIM4-205ENST00000496896 ARHGEF37A1IGU5 675 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SH3PXD2BA1X283 911 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TMEM150BA6NC51 233 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TRIM64A6NGJ6 449 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TRIM64BA6NI03 449 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 YDJCA8MPS7 323 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 A8MXE2 369 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 E9PBE3 544 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TXNDC9O14530 226 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SH3BGRLO75368 114 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 BANF1O75531 89 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 H6PDO95479 791 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SLC25A27O95847 323 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NPPAP01160 153 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 UMPSP11172 480 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NCF2P19878 526 aaPredicted RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 GIFP27352 417 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 HMOX2P30519 316 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 HSPA1LP34931 641 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 ALDH3B2P48448 385 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 MRPL19P49406 292 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NUDT2P50583 147 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 CRYBA2P53672 197 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 ADARP55265 1226 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NDUFV3P56181 108 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 PPIDQ08752 370 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 BST2Q10589 180 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 BNIP2Q12982 314 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 PRPSAP1Q14558 356 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SLC25A52Q3SY17 297 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NADK2Q4G0N4 442 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SFT2D3Q587I9 215 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SPANXN4Q5MJ08 99 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SAMD4BQ5PRF9 694 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 OLFML2AQ68BL7 652 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 OR6B2Q6IFH4 312 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 CASC4Q6P4E1 433 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 FAM183BPQ6ZVS7 135 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 FRA10AC1Q70Z53 315 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SMIM5Q71RC9 77 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NRARPQ7Z6K4 114 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 APOBEC3FQ8IUX4 373 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 C10orf107Q8IVU9 208 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 AQP12AQ8IXF9 295 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 C11orf53Q8IXP5 236 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 BBS5Q8N3I7 341 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TEX26Q8N6G2 289 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TRIML2Q8N7C3 387 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 ANKFN1Q8N957 763 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 COLGALT1Q8NBJ5 622 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 MINDY2Q8NBR6 621 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 RNF149Q8NC42 400 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 FNDC8Q8TC99 324 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 URGCPQ8TCY9 931 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 ARNTL2Q8WYA1 636 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 PEX13Q92968 403 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 BORCS5Q969J3 196 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NT5C3BQ969T7 300 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 HPDLQ96IR7 371 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF560Q96MR9 790 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 RDH12Q96NR8 316 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NEDD4LQ96PU5 975 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 CSPG4P5Q96PW8 444 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 PEBP4Q96S96 227 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SORT1Q99523 831 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 DOK1Q99704 481 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 CCT7Q99832 543 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 HOPXQ9BPY8 73 aaPredicted RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 MRPL57Q9BQC6 102 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 EBF4Q9BQW3 602 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 C9orf16Q9BUW7 83 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 RBM24Q9BX46 236 aaKnown RBP3.21□□□□□ -1.9
TRIM4-205ENST00000496896 GBA3Q9H227 469 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 RHOJQ9H4E5 214 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 SMYD3Q9H7B4 428 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 COG4Q9H9E3 785 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 WDR41Q9HAD4 459 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 NMRAL1Q9HBL8 299 aa3.21□□□□□ -1.9
TRIM4-205ENST00000496896 MYOZ2Q9NPC6 264 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms