RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 CCDC71Q8IV32 467 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 PCYOX1LQ8NBM8 494 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 OR52P1PQ8NH57 321 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 ZNF563Q8TA94 476 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 LRRC46Q96FV0 321 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 ANKRD27Q96NW4 1050 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 SH3GL1Q99961 368 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 CPPED1Q9BRF8 314 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 THUMPD3Q9BV44 507 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 QRSL1Q9H0R6 528 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 TMEM38AQ9H6F2 299 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 BCL2L10Q9HD36 194 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 KCNJ16Q9NPI9 418 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 CLCF1Q9UBD9 225 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 ZNF629Q9UEG4 869 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 Q9UFV3 132 aa17.36■□□□□ 0.37
CTDSP1-213ENST00000496785 SPTAN1Q13813 2472 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 ETV2O00321 342 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 ARAFP10398 606 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 PSMA4P25789 261 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 LSP1P33241 339 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SELENBP1Q13228 472 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 CYLC2Q14093 348 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SGCBQ16585 318 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 TRMT5Q32P41 509 aaKnown RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 REEP3Q6NUK4 255 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SEM1Q6ZVN7 128 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 RETREG3Q86VR2 466 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 FBXO27Q8NI29 283 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 ZG16BQ96DA0 208 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SPATA5L1Q9BVQ7 753 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SERINC1Q9NRX5 453 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 ZNF175Q9Y473 711 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 SPIN1Q9Y657 262 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 ICE1Q9Y2F5 2266 aa17.35■□□□□ 0.37
CTDSP1-213ENST00000496785 GMNCA6NCL1 334 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC22A20A6NK97 555 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 FAM90A27PA6NNH2 459 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 SHISA8B8ZZ34 492 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 EIF1AYO14602 144 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 TOXO94900 526 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 ETS2P15036 469 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 SLC6A2P23975 617 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 OPRM1P35372 400 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 GNGT1P63211 74 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 CDK6Q00534 326 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 RBBP4Q09028 425 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 MAPK11Q15759 364 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 ARHGAP21Q5T5U3 1957 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 MRPL2Q5T653 305 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 RNF220Q5VTB9 566 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 C3orf33Q6P1S2 294 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 LILRA2Q8N149 483 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 TNIP2Q8NFZ5 429 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 POC1BQ8TC44 478 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 ELAC2Q9BQ52 826 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 PINK1Q9BXM7 581 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 TIGARQ9NQ88 270 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 ASH1LQ9NR48 2969 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 ACER3Q9NUN7 267 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 GID8Q9NWU2 228 aa17.34■□□□□ 0.37
CTDSP1-213ENST00000496785 FAAHO00519 579 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 MRASO14807 208 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 RCBTB2O95199 551 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 PGM3O95394 542 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 IL18BPO95998 194 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 CRHP06850 196 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 NUDT7P0C024 238 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 TMIGD3P0DMS9 266 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 CTSSP25774 331 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 FKBP2P26885 142 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 HTR3AP46098 478 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 EIF1AXP47813 144 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 SEC24CP53992 1094 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 CLDN15P56746 228 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 CLDN20P56880 219 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 TOMM34Q15785 309 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 CYP51A1Q16850 503 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF550Q7Z398 422 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 GGNQ86UU5 652 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 SLC30A8Q8IWU4 369 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 OR2V1Q8NHB1 315 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 SLC25A43Q8WUT9 341 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 KLHL15Q96M94 604 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF607Q96SK3 696 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 SFXN3Q9BWM7 321 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 SPATA9Q9BWV2 254 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 FAM107BQ9H098 131 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 DNAJB12Q9NXW2 375 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 MCTS1Q9ULC4 181 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 ANGPT4Q9Y264 503 aa17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF443Q9Y2A4 671 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-213ENST00000496785 PRORSD1PA6NEY8 169 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 ADAMDEC1O15204 470 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SYNGR4O95473 234 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 NTN1O95631 604 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 CD1EP15812 388 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 RYKP34925 604 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 APOBEC1P41238 236 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SUCLG1P53597 346 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms