RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SSTP61278 116 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 RPS8P62241 208 aaKnown RBP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 GCNT7Q6ZNI0 430 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 TMEM26Q6ZUK4 368 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 Q6ZVH6 145 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 PAQR9Q6ZVX9 377 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 NANOGNBQ7Z5D8 188 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 MISPQ8IVT2 679 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 CERS5Q8N5B7 392 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ZNF321PQ8N8H1 164 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 CCDC26Q8TAB7 109 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 UBTD2Q8WUN7 234 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 PIBF1Q8WXW3 757 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 SLC41A3Q96GZ6 507 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 LINC00167Q96N53 147 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 PKIBQ9C010 78 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 SIRPDQ9H106 197 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 XKR8Q9H6D3 395 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 EXO5Q9H790 373 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ACTR8Q9H981 624 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 COG4Q9H9E3 785 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ROPN1Q9HAT0 212 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 TIGARQ9NQ88 270 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 CLEC4AQ9UMR7 237 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ROBO1Q9Y6N7 1651 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ROCK2O75116 1388 aaKnown RBP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 KNDC1Q76NI1 1749 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 TECPR2O15040 1411 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 EFCAB7A8K855 629 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 H0Y9J4 135 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NDUFS8O00217 210 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NMT2O60551 498 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 SMC2O95347 1197 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 GOT2P00505 430 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CSF2P04141 144 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 STAG3L3P0CL85 134 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 TNNI3P19429 210 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 ATP6V1C1P21283 382 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 HSD17B2P37059 387 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NSFP46459 744 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NUCB2P80303 420 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 PDK3Q15120 406 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 TPD52L1Q16890 204 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 APOOLQ6UXV4 268 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CENPQQ7L2Z9 268 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 EFL1Q7Z2Z2 1120 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 TMCO2Q7Z6W1 182 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 OR6M1Q8NGM8 313 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 OR8J1Q8NGP2 316 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 OR4L1Q8NH43 312 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 U2AF1L4Q8WU68 220 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 C17orf50Q8WW18 174 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 FCGR1BQ92637 280 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 RASD2Q96D21 266 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NUS1Q96E22 293 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 C19orf60Q96EN9 201 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CCT8L2Q96SF2 557 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 GON7Q9BXV9 100 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 MRPL13Q9BYD1 178 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CRNKL1Q9BZJ0 848 aaKnown RBP3.98□□□□□ -1.77
SF3B1-212ENST00000496458 METTL7AQ9H8H3 244 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 AGPAT5Q9NUQ2 364 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 ETNK2Q9NVF9 386 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 IMPAD1Q9NX62 359 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 NDUFA13Q9P0J0 144 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 PRODH2Q9UF12 536 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 IL20RAQ9UHF4 553 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 C1orf167Q5SNV9 1468 aa3.98□□□□□ -1.77
SF3B1-212ENST00000496458 DCCP43146 1447 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 DLC1Q96QB1 1528 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 TRPM1Q7Z4N2 1603 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 A0A075B6Q4 140 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 A0A0U1RQV5 110 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 A0A0U1RRA0 63 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 CDX4O14627 284 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 NME2P1O60361 137 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 TSPAN2O60636 221 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SNNO75324 88 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 ATP6V1G1O75348 118 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 AGTP01019 485 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 IVLP07476 585 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 UQCRFS1P1P0C7P4 283 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 UCP1P25874 307 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 PTBP1P26599 531 aaKnown RBP eCLIP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 ADRA1AP35348 466 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SLC7A2P52569 658 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 NDST1P52848 882 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 EIF3EP60228 445 aaKnown RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SRSF5Q13243 272 aaKnown RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 GK2Q14410 553 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 STX1AQ16623 288 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 MICAQ29983 383 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 STEAP1BQ6NZ63 245 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 MOB2Q70IA6 237 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 ADGRD2Q7Z7M1 963 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 UBQLNLQ8IYU4 475 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SIDT2Q8NBJ9 832 aaKnown RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SUN5Q8TC36 379 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms