RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ABCD3P28288 659 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 EMP2P54851 167 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 TMBIM6P55061 237 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 MC2RQ01718 297 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 LSAMPQ13449 338 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 IRF3Q14653 427 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 SNAPC1Q16533 368 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 FAM69BQ5VUD6 431 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 UBE2UQ5VVX9 321 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 ULK3Q6PHR2 472 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 CLDN22Q8N7P3 220 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF527Q8NB42 609 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 WDR36Q8NI36 951 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 BPIFA2Q96DR5 249 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 LRR1Q96L50 414 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 SAMD8Q96LT4 415 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 Q96MT0 163 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 KLHDC3Q9BQ90 382 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 ENKD1Q9H0I2 346 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 KRCC1Q9NPI7 259 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 MRTO4Q9UKD2 239 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 PPIEQ9UNP9 301 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 GPR52Q9Y2T5 361 aa12.55□□□□□ -0.4
SPTBN1-205ENST00000496323 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 SAGE2PA6NJ88 616 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 SCDO00767 359 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 FLRT2O43155 660 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 HPGDP15428 266 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PEX19P40855 299 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 RNF4P78317 190 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 TBCEQ15813 527 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 C16orf47Q6ZP98 133 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 CACTIN-AS1Q8N1I8 211 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 STX19Q8N4C7 294 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 C17orf47Q8NEP4 570 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PHOSPHO1Q8TCT1 267 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 BRIX1Q8TDN6 353 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 OMA1Q96E52 524 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 MPP4Q96JB8 637 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 HS6ST2Q96MM7 605 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 FBXO8Q9NRD0 319 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 CARD8Q9Y2G2 431 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 C17orf51A8MQB3 221 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 CDX4O14627 284 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 CH25HO95992 272 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 UBL4AP11441 157 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PIPP12273 146 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PSMB9P28065 219 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 RBM34P42696 430 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 MLLT10P55197 1068 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 PLAG1Q6DJT9 500 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 FAM199XQ6PEV8 388 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 TMEM205Q6UW68 189 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 ERI1Q8IV48 349 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 SLC34A3Q8N130 599 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 TMEM163Q8TC26 289 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 METTL21AQ8WXB1 218 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 HSPBAP1Q96EW2 488 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 OR52D1Q9H346 318 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 UBQLN3Q9H347 655 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 HHATLQ9HCP6 504 aa12.54□□□□□ -0.4
SPTBN1-205ENST00000496323 GNB5O14775 395 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 SURF4O15260 269 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF354AO60765 605 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 PTHP01270 115 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 DBTP11182 482 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 CD59P13987 128 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 IL12BP29460 328 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 LCN1P31025 176 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 PGGHGQ32M88 737 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 PAPD4Q6PIY7 484 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 HSDL2Q6YN16 418 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF440Q8IYI8 595 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 C8orf44Q96CB5 159 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 CRB3Q9BUF7 120 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 SIGLEC7Q9Y286 467 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 A0A087WUJ7 227 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 TMEM200CA6NKL6 621 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 ZNF264O43296 627 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 PTP4A3O75365 173 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 MST1P26927 711 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 FHL1Q13642 323 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 DOC2BQ14184 412 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
SPTBN1-205ENST00000496323 CPEB2Q7Z5Q1 589 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms