RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 GFRA3O60609 400 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF354AO60765 605 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 ADAM11O75078 769 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 CELA2AP08217 269 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 LIPCP11150 499 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 PGCP20142 388 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 POLR2IP36954 125 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 SSR4P51571 173 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 P2RX1P51575 399 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 NUP107P57740 925 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF117Q03924 483 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 C17orf67Q0P5P2 114 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 TSPAN31Q12999 210 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 IL10RAQ13651 578 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 CBFBQ13951 182 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 MARCH9Q86YJ5 346 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 OR5M3Q8NGP4 307 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF563Q8TA94 476 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 ASB15Q8WXK1 588 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 NODALQ96S42 347 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 PNMTP11086 282 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 OMPP47874 163 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 IDH2P48735 452 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 CRISP1P54107 249 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 MLF1P58340 268 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 JMJD6Q6NYC1 403 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 TTC33Q6PID6 262 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 NRMQ8IXM6 262 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 OR5W2Q8NH69 310 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 RNF138Q8WVD3 245 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 SH3YL1Q96HL8 342 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 SECISBP2Q96T21 854 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 YTHDF1Q9BYJ9 559 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 CDCP1Q9H5V8 836 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 C12orf10Q9HB07 376 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 KLRF1Q9NZS2 232 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 MYRFQ9Y2G1 1151 aa22.31■■□□□ 1.16
PPP1R3F-205ENST00000495799 E9PQ18 207 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 SDHBP21912 280 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 FPR3P25089 353 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 ITPKBP27987 946 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 SUMO3P55854 103 aaPredicted RBP22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 CBLN3Q6UW01 205 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 PRICKLE2Q7Z3G6 844 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 DEPDC4Q8N2C3 294 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 B4GALNT2Q8NHY0 566 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 METTL7AQ9H8H3 244 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 SCOCQ9UIL1 159 aa22.3■■□□□ 1.16
PPP1R3F-205ENST00000495799 OIP5O43482 229 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 OR6B1O95007 311 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 SOX3P41225 446 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 GSSP48637 474 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 MYBPC1Q00872 1141 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 IL5RAQ01344 420 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 PRKCDQ05655 676 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF791Q3KP31 576 aaPredicted RBP22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 ADAMTS17Q8TE56 1095 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 FAM46AQ96IP4 442 aaKnown RBP22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 REV1Q9UBZ9 1251 aa22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 MRPS18BQ9Y676 258 aaKnown RBP22.29■■□□□ 1.16
PPP1R3F-205ENST00000495799 HTR3EA5X5Y0 456 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 H3BN98 237 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 NUDT14O95848 222 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 CHMP24386 653 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 GGT2P36268 569 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 RAPSNQ13702 412 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 ATP1A4Q13733 1029 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 H3F3CQ6NXT2 135 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 TMEM81Q6P7N7 255 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 LINC00114Q6XXX2 140 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 WDR88Q6ZMY6 472 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 RASSF6Q6ZTQ3 369 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 TMEM156Q8N614 296 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 OR10G3Q8NGC4 313 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 C3orf49Q96BT1 292 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 FER1L6-AS2Q96M78 137 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF426Q9BUY5 554 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 RTN4RQ9BZR6 473 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF696Q9H7X3 374 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 ICAM5Q9UMF0 924 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 KNTC1P50748 2209 aa22.28■■□□□ 1.16
PPP1R3F-205ENST00000495799 A0A087WUJ7 227 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ELOA3DA6NLF2 546 aaPredicted RBP22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 MSX1P28360 303 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 SLC1A3P43003 542 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 CTBP2P56545 445 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 CDC42P60953 191 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 SNTA1Q13424 505 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 RTP5Q14D33 572 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ELOA3BQ3SY89 546 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZNF786Q8N393 782 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ELOA3Q8NG57 546 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 DUSP19Q8WTR2 217 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ARSGQ96EG1 525 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 SLC19A3Q9BZV2 496 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 IL17BQ9UHF5 180 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 PCDHGB5Q9Y5G0 923 aa22.27■■□□□ 1.16
PPP1R3F-205ENST00000495799 ZAR1LA6NP61 321 aa22.26■■□□□ 1.15
PPP1R3F-205ENST00000495799 PIP5K1CO60331 668 aa22.26■■□□□ 1.15
PPP1R3F-205ENST00000495799 CDC40O60508 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms