RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	MYH15	Q9Y2K3	1946 aa		4.21	□□□□□ -1.74
CCDC66-222	ENST00000494672	VPS8	Q8N3P4	1428 aa		4.21	□□□□□ -1.74
CCDC66-222	ENST00000494672	CHD5	Q8TDI0	1954 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CCDC141	Q6ZP82	1450 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ABCC12	Q96J65	1359 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	EDDM13	A0A1B0GTR0	161 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672		A0A1B0GW15	77 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	LNP1	A1A4G5	178 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	GMNC	A6NCL1	334 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	METTL21EP	A6NDL7	271 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	USP27X	A6NNY8	438 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672		G3V2T6	193 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672		H3BQ06	376 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	KLRC4-KLRK1	H3BQV0	150 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	KPNA3	O00505	521 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ARPC5	O15511	151 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	FLRT2	O43155	660 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF264	O43296	627 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	EDIL3	O43854	480 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SSX4	O60224	188 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SNN	O75324	88 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	AVIL	O75366	819 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	POP7	O75817	140 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ACSL3	O95573	720 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	APOH	P02749	345 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	RAF1	P04049	648 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	UGT2B4	P06133	528 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SPARC	P09486	303 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF806	P0C7X5	589 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	STAG3L1	P0CL83	205 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	MBL2	P11226	248 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	IFI30	P13284	250 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	NR1D1	P20393	614 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PAX6	P26367	422 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	MARCKS	P29966	332 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	EPHX2	P34913	555 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CA5A	P35218	305 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	TIMP3	P35625	211 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PGM1	P36871	562 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	P2RY2	P41231	377 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	FRK	P42685	505 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PRKX	P51817	358 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CDH13	P55290	713 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	UCP2	P55851	309 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	MAGOH	P61326	146 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ERVS71-1	P61550	626 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	RPS15	P62841	145 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CSNK2A1	P68400	391 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CNTN2	Q02246	1040 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	BDH1	Q02338	343 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	IRF8	Q02556	426 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	FOLH1	Q04609	750 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	MBTD1	Q05BQ5	628 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	BST1	Q10588	318 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	AIMP2	Q13155	320 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLAMF1	Q13291	335 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	TFDP2	Q14188	446 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PTPRCAP	Q14761	206 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	OXA1L	Q15070	435 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC9A3R2	Q15599	337 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CHI3L2	Q15782	390 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	DEFB115	Q30KQ5	88 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PAN3	Q58A45	887 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	HIST2H2BC	Q6DN03	193 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	RGMB	Q6NW40	437 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	INO80C	Q6PI98	192 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	FIGLA	Q6QHK4	219 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SPESP1	Q6UW49	350 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CD300LG	Q6UXG3	332 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	C15orf39	Q6ZRI6	1047 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC16A14	Q7RTX9	510 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	GPR180	Q86V85	440 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PHF13	Q86YI8	300 aa	Predicted RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ODF3L1	Q8IXM7	274 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	FAM71A	Q8IYT1	594 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	STX19	Q8N4C7	294 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZCCHC9	Q8N567	271 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZBTB2	Q8N680	514 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	L3MBTL4	Q8NA19	623 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	UXS1	Q8NBZ7	420 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CSNK2A3	Q8NEV1	391 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR7G3	Q8NG95	312 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR5B17	Q8NGF7	314 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR9A2	Q8NGT5	310 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	NFKBID	Q8NI38	313 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	TRUB1	Q8WWH5	349 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ARNTL2	Q8WYA1	636 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	GTF2H4	Q92759	462 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	DCPS	Q96C86	337 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	CCDC124	Q96CT7	223 aa	Known RBP	4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PCDHB18P	Q96TA0	734 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	LGMN	Q99538	433 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	PIGQ	Q9BRB3	760 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	MED18	Q9BUE0	208 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	TM6SF2	Q9BZW4	377 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ROGDI	Q9GZN7	287 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF350	Q9GZX5	532 aa		4.2	□□□□□ -1.74
CCDC66-222	ENST00000494672	ARMC7	Q9H6L4	198 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms