RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SKP2Q13309 424 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 FGFBP1Q14512 234 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 GPR68Q15743 365 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 SYPL1Q16563 259 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 NDUFAF6Q330K2 333 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ATAD3BQ5T9A4 648 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 AAGABQ6PD74 315 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 POMZP3Q6PJE2 187 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ENPP6Q6UWR7 440 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 C16orf62Q7Z3J2 963 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF619Q8N2I2 560 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 GTPBP8Q8N3Z3 284 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ANKFN1Q8N957 763 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF527Q8NB42 609 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ACBD4Q8NC06 268 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 NAXEQ8NCW5 288 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 B4GALNT2Q8NHY0 566 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 MBD3L2Q8NHZ7 208 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-217ENST00000494395 PNPT1Q8TCS8 783 aaKnown RBP7.91□□□□□ -1.14
ITGB1-217ENST00000494395 PHOSPHO1Q8TCT1 267 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ZPLD1Q8TCW7 415 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 TSPEARQ8WU66 669 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 C10orf82Q8WW14 230 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 RND1Q92730 232 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 SDCCAG3Q96C92 435 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ZG16BQ96DA0 208 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ARSGQ96EG1 525 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 SFXN2Q96NB2 322 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 TRNT1Q96Q11 434 aaKnown RBP7.91□□□□□ -1.14
ITGB1-217ENST00000494395 TUBA1CQ9BQE3 449 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 PTGES2Q9H7Z7 377 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 MED17Q9NVC6 651 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 VAPAQ9P0L0 249 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 Q9UFV3 132 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 LIPT1Q9Y234 373 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 CARD8Q9Y2G2 431 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF337Q9Y3M9 751 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 WDR45Q9Y484 360 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 DSPPQ9NZW4 1301 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 NBPF19A0A087WUL8 3843 aa7.91□□□□□ -1.14
ITGB1-217ENST00000494395 ADGRG4Q8IZF6 3080 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 FLNBO75369 2602 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 A0A087WZY1 265 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 A0A1W2PP18 115 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CLIC1O00299 241 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 GMFGO60234 142 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 EIF4E2O60573 245 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CLDN14O95500 239 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 ANP32DO95626 131 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 NTN1O95631 604 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 VIMP08670 466 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TROVE2P10155 538 aaKnown RBP eCLIP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 UBL4AP11441 157 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 PEPDP12955 493 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 HPGDP15428 266 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF17P17021 662 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TCEA1P23193 301 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 COL8A1P27658 744 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CHRNB4P30926 498 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TIMP3P35625 211 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 PGM1P36871 562 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 P2RX1P51575 399 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 SUCLG1P53597 346 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 DLX5P56178 289 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CHRNEQ04844 493 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 FADDQ13158 208 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 RGNQ15493 299 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TOMM34Q15785 309 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 ZNF630Q2M218 657 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CTU2Q2VPK5 515 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 SLC25A53Q5H9E4 307 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 C6orf10Q5SRN2 563 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 RAET1LQ5VY80 246 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 LRRC74BQ6ZQY2 392 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 GGNQ86UU5 652 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 LACC1Q8IV20 430 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CCDC71Q8IV32 467 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 LIX1LQ8IVB5 337 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 C10orf111Q8N326 155 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 DPP10Q8N608 796 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TOR1AIP2Q8NFQ8 470 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 TNIP2Q8NFZ5 429 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 OR5M1Q8NGP8 315 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 LILRB4Q8NHJ6 448 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 GPR119Q8TDV5 335 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 SH3YL1Q96HL8 342 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 ADGRG7Q96K78 797 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 PIGQQ9BRB3 760 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CPPED1Q9BRF8 314 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 RSPO3Q9BXY4 272 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 QRSL1Q9H0R6 528 aaKnown RBP7.9□□□□□ -1.14
ITGB1-217ENST00000494395 RABEP2Q9H5N1 569 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 IKZF5Q9H5V7 419 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CALHM2Q9HA72 323 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 CAMK2AQ9UQM7 478 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 VDAC3Q9Y277 283 aa7.9□□□□□ -1.14
ITGB1-217ENST00000494395 AGAP5A6NIR3 686 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms