RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ZNF556Q9HAH1 456 aa18.86■□□□□ 0.61
KPNA1-210ENST00000494339 GALNT9Q9HCQ5 603 aa18.86■□□□□ 0.61
KPNA1-210ENST00000494339 ENOPH1Q9UHY7 261 aa18.86■□□□□ 0.61
KPNA1-210ENST00000494339 POFUT2Q9Y2G5 429 aa18.86■□□□□ 0.61
KPNA1-210ENST00000494339 A0A087WUU8 490 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 A6NHS1 94 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 GASTP01350 101 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 SPINK2P20155 84 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 SDHBP21912 280 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 SSR4P51571 173 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 TPD52P55327 224 aaPredicted RBP18.85■□□□□ 0.61
KPNA1-210ENST00000494339 CHAF1BQ13112 559 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 KEAP1Q14145 624 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 KCTD21Q4G0X4 260 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 DCAF10Q5QP82 559 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 TMEM255BQ8WV15 326 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 ASB15Q8WXK1 588 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 NXPE2Q96DL1 559 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 THOC3Q96J01 351 aaKnown RBP18.85■□□□□ 0.61
KPNA1-210ENST00000494339 IP6K3Q96PC2 410 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 KLHDC3Q9BQ90 382 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 TRIM2Q9C040 744 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 EXOSC3Q9NQT5 275 aaKnown RBP18.85■□□□□ 0.61
KPNA1-210ENST00000494339 PAPOLBQ9NRJ5 636 aaKnown RBP18.85■□□□□ 0.61
KPNA1-210ENST00000494339 EML6Q6ZMW3 1958 aa18.85■□□□□ 0.61
KPNA1-210ENST00000494339 A0A1B0GWA3 101 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 C2orf72A6NCS6 295 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 BCKDKO14874 412 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 CLK3P49761 638 aaKnown RBP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ZNF791Q3KP31 576 aaPredicted RBP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ZNF613Q6PF04 617 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ZNF730Q6ZMV8 503 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 APLFQ8IW19 511 aaPredicted RBP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ZNF786Q8N393 782 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 LINC00471Q8N535 108 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 TMEM156Q8N614 296 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 LSMEM1Q8N8F7 131 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 SETD9Q8NE22 299 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 GABARAPL3Q9BY60 117 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 MRPS26Q9BYN8 205 aaKnown RBP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 LAT2Q9GZY6 243 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ING2Q9H160 280 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 RIBC2Q9H4K1 309 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ANKRD19PQ9H560 264 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 KLRF1Q9NZS2 232 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 MED13Q9UHV7 2174 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 A0A0B4J2E0 115 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 A0A1B0GX12 115 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ADAM10O14672 748 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 SMNDC1O75940 238 aaKnown RBP eCLIP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 CBLP22681 906 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 POLR2IP36954 125 aaKnown RBP18.84■□□□□ 0.61
KPNA1-210ENST00000494339 COPZ1P61923 177 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 NPRL3Q12980 569 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ZNF691Q5VV52 312 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 OPN5Q6U736 354 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 WDR88Q6ZMY6 472 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 ARMC10Q8N2F6 343 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 DUSP19Q8WTR2 217 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 PRSS27Q9BQR3 290 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 METTL7AQ9H8H3 244 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 RPS6KB2Q9UBS0 482 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 HSPE1-MOB4S4R3N1 261 aa18.84■□□□□ 0.61
KPNA1-210ENST00000494339 LYPD3O95274 346 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 SMIM18P0DKX4 95 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 ITPKBP27987 946 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 IDH2P48735 452 aaKnown RBP18.83■□□□□ 0.6
KPNA1-210ENST00000494339 ALG10BQ5I7T1 473 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 OR5M10Q6IEU7 315 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 H3F3CQ6NXT2 135 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 PGBD2Q6P3X8 592 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 RRM2BQ7LG56 351 aa18.83■□□□□ 0.6
KPNA1-210ENST00000494339 MEX3DQ86XN8 651 aaKnown RBP18.83■□□□□ 0.6
KPNA1-210ENST00000494339 ACOT11Q8WXI4 607 aaPredicted RBP18.83■□□□□ 0.6
KPNA1-210ENST00000494339 DPPA5A6NC42 116 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ENDOUP21128 410 aaKnown RBP18.82■□□□□ 0.6
KPNA1-210ENST00000494339 TBC1D25Q3MII6 688 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 TSPAN14Q8NG11 270 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 PSMF1Q92530 271 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 APOL4Q9BPW4 351 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 NDRG4Q9ULP0 352 aaKnown RBP18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ICAM5Q9UMF0 924 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 EIF4E2O60573 245 aaKnown RBP18.82■□□□□ 0.6
KPNA1-210ENST00000494339 NUDT14O95848 222 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 CLPTM1O96005 669 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 PRKAR1AP10644 381 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ITGA3P26006 1051 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ACER2Q5QJU3 275 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ZNF468Q5VIY5 522 aaPredicted RBP18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ISLR2Q6UXK2 745 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ZER1Q7Z7L7 766 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 PARP8Q8N3A8 854 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ZNF524Q96C55 264 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 FER1L6-AS2Q96M78 137 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ATP13A2Q9NQ11 1180 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 ANKRD10Q9NXR5 420 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 MGAT4BQ9UQ53 548 aa18.82■□□□□ 0.6
KPNA1-210ENST00000494339 CHCHD2Q9Y6H1 151 aaPredicted RBP18.82■□□□□ 0.6
KPNA1-210ENST00000494339 TRIM64A6NGJ6 449 aa18.81■□□□□ 0.6
KPNA1-210ENST00000494339 E9PQ18 207 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms