RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 FAM3CQ92520 227 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ATOH1Q92858 354 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 DAZLQ92904 295 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NAT6Q93015 286 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CPNE4Q96A23 557 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FAM131CQ96AQ9 280 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PYCR2Q96C36 320 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 C8orf44Q96CB5 159 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SMIM10Q96HG1 83 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 METTL2AQ96IZ6 378 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NSMCE3Q96MG7 304 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF582Q96NG8 517 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 AMDHD1Q96NU7 426 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TAAR1Q96RJ0 339 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RANBP9Q96S59 729 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CYP2S1Q96SQ9 504 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NDNQ99608 321 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 COPS8Q99627 209 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 APOL2Q9BQE5 337 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SYT11Q9BT88 431 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 DPH7Q9BTV6 452 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FUCA2Q9BTY2 467 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NDUFAF3Q9BU61 184 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CCDC28BQ9BUN5 200 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TSSK1BQ9BXA7 367 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SLC2A11Q9BYW1 496 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SRRQ9GZT4 340 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 C6orf62Q9GZU0 229 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TOLLIPQ9H0E2 274 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 OR51B6Q9H340 312 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FAM124BQ9H5Z6 455 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 EGLN3Q9H6Z9 239 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ATP13A3Q9H7F0 1226 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 VIPAS39Q9H9C1 493 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 EBF2Q9HAK2 575 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FOLH1BQ9HBA9 442 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 LPAR2Q9HBW0 351 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 POLD4Q9HCU8 107 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RAB9BQ9NP90 201 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 HINT3Q9NQE9 182 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 OR2S2Q9NQN1 319 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CNGB3Q9NQW8 809 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GSN-AS1Q9NRJ2 163 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ZFP57Q9NU63 452 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NDE1Q9NXR1 346 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MRPL39Q9NYK5 338 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 USE1Q9NZ43 259 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CD274Q9NZQ7 290 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ABCD2Q9UBJ2 740 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 LHX3Q9UBR4 397 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 WARS2Q9UGM6 360 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NDRG3Q9UGV2 375 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PSORS1C1Q9UIG5 152 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 LNPEPQ9UIQ6 1025 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MAN1B1Q9UKM7 699 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ACSL5Q9ULC5 683 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RNF6Q9Y252 685 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GSTK1Q9Y2Q3 226 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RNF115Q9Y4L5 304 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FADS3Q9Y5Q0 445 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 KPTNQ9Y664 436 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CACNG2Q9Y698 323 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 URGCP-MRPS24S4R325 110 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 SCRIBQ14160 1630 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TRAV18A0A075B6X5 111 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 A0A1B0GTI1 187 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 KBTBD11-OT1A0A1B0GTJ5 212 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 A0A1W2PNV4 684 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SH3PXD2BA1X283 911 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CASTOR2A6NHX0 329 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 LILRA5A6NI73 299 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SHISA7A6NL88 538 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CCT8L1PA6NM43 557 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF99A8MXY4 864 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 H3BTX0 84 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TMEM189-UBE2V1I3L0A0 370 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 J3QR06 171 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DLGAP1O14490 977 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TRAFD1O14545 582 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CYB561D2O14569 222 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RFXANKO14593 260 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CLOCKO15516 846 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 B4GAT1O43505 415 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SYT7O43581 403 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TSPAN2O60636 221 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR2J3O76001 311 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 BRI3O95415 125 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CLDN9O95484 217 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ETHE1O95571 254 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 EPOP01588 193 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RAF1P04049 648 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR4E1P0C645 316 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 UBCP0CG48 685 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PSKH1P11801 424 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ATP1B2P14415 290 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 UQCRBP14927 111 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NCK1P16333 377 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF26P17031 533 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ATF6P18850 670 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms