RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 NPIPA5E9PKD4 350 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CCL21O00585 134 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 BCKDKO14874 412 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RGS5O15539 181 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 TPST1O60507 370 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 GMDSO60547 372 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 PRMT3O60678 531 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 PTP4A3O75365 173 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SH3BGRLO75368 114 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CYP7B1O75881 506 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 WDR47O94967 919 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SNAPINO95295 136 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 C1GALT1C1LP0DN25 315 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ATP5F1P24539 256 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 GTF2E2P29084 291 aaKnown RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 AHRP35869 848 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CA7P43166 264 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 HSPA7P48741 367 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 AGTR2P50052 363 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 GPR143P51810 404 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MLF1P58340 268 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ISL1P61371 349 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 NCS1P62166 190 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SLC35A2P78381 396 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 BTN3A2P78410 334 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 EXT1Q16394 746 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 AANATQ16613 207 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MEP1AQ16819 746 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF793Q6ZN11 406 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 QSOX2Q6ZRP7 698 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 STK32CQ86UX6 486 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RPS19BP1Q86WX3 136 aaKnown RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SLC22A9Q8IVM8 553 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 OR8H2Q8N162 312 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MIER2Q8N344 545 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 NKAPQ8N5F7 415 aaKnown RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF321PQ8N8H1 164 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 APCDD1LQ8NCL9 501 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 SLC22A8Q8TCC7 542 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ADAMTS18Q8TE60 1221 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 AKAP1Q92667 903 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MYDGFQ969H8 173 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MS4A6EQ96DS6 147 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZC3HAV1LQ96H79 300 aaKnown RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RADILQ96JH8 1075 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 GPR137Q96N19 417 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 WDFY2Q96P53 400 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 DCLRE1CQ96SD1 692 aaKnown RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 LPAR4Q99677 370 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 EGFL8Q99944 293 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF416Q9BWM5 594 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 PRR14Q9BWN1 585 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CLEC4MQ9H2X3 399 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RHOJQ9H4E5 214 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ALG2Q9H553 416 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RANBP3Q9H6Z4 567 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RNF121Q9H920 327 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RANGRFQ9HD47 186 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ACOT13Q9NPJ3 140 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF224Q9NZL3 707 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CCDC167Q9P0B6 97 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZDHHC2Q9UIJ5 367 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 RNF6Q9Y252 685 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF835Q9Y2P0 537 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 DYRK1BQ9Y463 629 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 CACNG2Q9Y698 323 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 MED12Q93074 2177 aa7.53□□□□□ -1.2
HDAC6-234ENST00000493923 NCKAP5O14513 1909 aa7.52□□□□□ -1.2
HDAC6-234ENST00000493923 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 NINQ8N4C6 2090 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SLC35F4A4IF30 521 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PINLYPA6NC86 204 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 LRRC14BA6NHZ5 514 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 OR6C65A6NJZ3 312 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 H3BUI4 141 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 RTCAO00442 366 aaKnown RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ADAM10O14672 748 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF354AO60765 605 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SLC19A2O60779 497 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PPM1BO75688 479 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 C2P06681 752 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CHRNGP07510 517 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SP1P08047 785 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CYC1P08574 325 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 HOXD4P09016 255 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 RBP1P09455 135 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 RNH1P13489 461 aaKnown RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CD1DP15813 335 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms