RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CLEC7AQ9BXN2 247 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 NXF5Q9H1B4 397 aaKnown RBP3.71□□□□□ -1.82
GTF3A-208ENST00000493903 TMEM185BQ9H7F4 350 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 SP140LQ9H930 580 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 POLE4Q9NR33 117 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 DEPPQ9NTK1 212 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 IL36GQ9NZH8 169 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 KCNG2Q9UJ96 466 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 OARD1Q9Y530 152 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 METP08581 1390 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 MSH6P52701 1360 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 CROCC2H7BZ55 1655 aa3.71□□□□□ -1.82
GTF3A-208ENST00000493903 NOS1P29475 1434 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 NCOA3Q9Y6Q9 1424 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 CHD2O14647 1828 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FRG2CA6NGY1 282 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 G3V4G9 280 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FAM72CH0Y354 149 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 HAS3O00219 553 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ABCD4O14678 606 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 POLR2DO15514 142 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ARHGEF9O43307 516 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 IGHG4P01861 327 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 PLA2G2AP14555 144 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 SELEP16581 610 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 CASP14P31944 242 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 OTX1P32242 354 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 TIMP3P35625 211 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 MAP2K2P36507 400 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 RPL4P36578 427 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 OPRL1P41146 370 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 MAGEA1P43355 309 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 GNPDA1P46926 289 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 NOVA1P51513 510 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 TPMTP51580 245 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 NANOS2P60321 138 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 RPS15P62841 145 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 GSTO1P78417 241 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 PLOD1Q02809 727 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 RBBP5Q15291 538 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF672Q499Z4 452 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FAM76BQ5HYJ3 339 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FAM72AQ5TYM5 149 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 LIPNQ5VXI9 398 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF772Q68DY9 489 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FAM72DQ6L9T8 149 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 DHDDSQ86SQ9 333 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 KCNMB4Q86W47 210 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 TRIM69Q86WT6 500 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FAM72BQ86X60 149 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 BPIFB2Q8N4F0 458 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 NUP37Q8NFH4 326 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 OR52B6Q8NGF0 335 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 FNDC8Q8TC99 324 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 HAVCR1Q96D42 359 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 TSNARE1Q96NA8 513 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 TGS1Q96RS0 853 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 CITED1Q99966 193 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 RBM4Q9BWF3 364 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 IQCGQ9H095 443 aaKnown RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 HIPK2Q9H2X6 1198 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ZDHHC18Q9NUE0 388 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 KLHL28Q9NXS3 571 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 SIGLEC8Q9NYZ4 499 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 IKZF2Q9UKS7 526 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 RARRES3Q9UL19 164 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 BARX2Q9UMQ3 279 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ABCG2Q9UNQ0 655 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 SCML2Q9UQR0 700 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 SETBP1Q9Y6X0 1596 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 EP400Q96L91 3159 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.7□□□□□ -1.82
GTF3A-208ENST00000493903 NHSL1Q5SYE7 1610 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 ASXL1Q8IXJ9 1541 aa3.7□□□□□ -1.82
GTF3A-208ENST00000493903 KIF15Q9NS87 1388 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 PLEKHG1Q9ULL1 1385 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 NINLQ9Y2I6 1382 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 A0A1B0GTQ1 180 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF840PA6NDX5 716 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 BMPR1BO00238 502 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 KCNAB3O43448 404 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 SPOPO43791 374 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 CA1P00915 261 aaPredicted RBP3.69□□□□□ -1.82
GTF3A-208ENST00000493903 CST1P01037 141 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 RHOXF2BP0C7M4 288 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 ETS2P15036 469 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 PRKACGP22612 351 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 NMT1P30419 496 aaKnown RBP3.69□□□□□ -1.82
GTF3A-208ENST00000493903 CHRNB4P30926 498 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 MMP12P39900 470 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 POU3F4P49335 361 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 CRYBB1P53674 252 aaPredicted RBP3.69□□□□□ -1.82
GTF3A-208ENST00000493903 ATP1B3P54709 279 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 FOXG1P55316 489 aaPredicted RBP3.69□□□□□ -1.82
GTF3A-208ENST00000493903 C21orf59P57076 290 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 RGS8P57771 180 aaPredicted RBP3.69□□□□□ -1.82
GTF3A-208ENST00000493903 ERVFC1-1P60608 527 aa3.69□□□□□ -1.82
GTF3A-208ENST00000493903 SNRPD1P62314 119 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms