RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 CALML5Q9NZT1 146 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLAMF8Q9P0V8 285 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 KLHL14Q9P2G3 628 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 Q9UFV3 132 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ICAM5Q9UMF0 924 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC35A3Q9Y2D2 325 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PHF3Q92576 2039 aaKnown RBP9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 PCNX3Q9H6A9 2034 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 ACANP16112 2415 aa9.39□□□□□ -0.91
TRAPPC12-222ENST00000493792 CD8B2A6NJW9 211 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 NUDT7P0C024 238 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMIGD3P0DMS9 266 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 CD99P14209 185 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF17P17021 662 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 PGCP20142 388 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 SFTPDP35247 375 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 EIF1P41567 113 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 EIF1AXP47813 144 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 MVDP53602 400 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 GYS2P54840 703 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 CLDN15P56746 228 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 KCNJ10P78508 379 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 FGFBP1Q14512 234 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 QPRTQ15274 297 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 TOMM34Q15785 309 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 BCL2A1Q16548 175 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 LRIF1Q5T3J3 769 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 GCNT6Q5T4J0 391 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 SEM1Q6ZVN7 128 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 GTPBP8Q8N3Z3 284 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 LILRB4Q8NHJ6 448 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 GPR119Q8TDV5 335 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 MAL2Q969L2 176 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 ELAC2Q9BQ52 826 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 NSRP1Q9H0G5 558 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF385DQ9H6B1 395 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 MTHFD2LQ9H903 347 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 CALHM2Q9HA72 323 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 MRGBPQ9NV56 204 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC25A37Q9NYZ2 338 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 VAPAQ9P0L0 249 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 AP4B1Q9Y6B7 739 aa9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 NCOA6Q14686 2063 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC12-222ENST00000493792 ARHGAP21Q5T5U3 1957 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 LOC100653049A0A140TA62 436 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 AGAP5A6NIR3 686 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC22A20A6NK97 555 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 EEF1E1-BLOC1S5C9J1V9 151 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 DVL2O14641 736 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TNFSF11O14788 317 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 BCAS1O75363 584 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 KRT34O76011 436 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TOXO94900 526 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 DBIP07108 87 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 GUSBP08236 651 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TFPTP0C1Z6 253 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 LINGO3P0C6S8 592 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 PRKCAP17252 672 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 IL11P20809 199 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TIMP3P35625 211 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SUCLG1P53597 346 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SEC24CP53992 1094 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 GNGT1P63211 74 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 MERTKQ12866 999 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 KLF10Q13118 480 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 FADDQ13158 208 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SKP2Q13309 424 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 CAPRIN1Q14444 709 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 MAPRE2Q15555 327 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMEM44Q2T9K0 475 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 PDSS1Q5T2R2 415 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 HBMQ6B0K9 141 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 VRK2Q86Y07 508 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 LIX1LQ8IVB5 337 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 MSRB3Q8IXL7 192 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 GCNT2Q8N0V5 402 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 LILRA2Q8N149 483 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 NAXEQ8NCW5 288 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 OR52P1PQ8NH57 321 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 NFKBIDQ8NI38 313 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 POC1BQ8TC44 478 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TSPEARQ8WU66 669 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMEM234Q8WY98 164 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 CNOT9Q92600 299 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 WNT2BQ93097 391 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 INTS12Q96CB8 462 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF845Q96IR2 970 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF317Q96PQ6 595 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC52A3Q9NQ40 469 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 SAR1AQ9NR31 198 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms