RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 EMDP50402 254 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 GPR143P51810 404 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 GFERP55789 205 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 OR1D5P58170 312 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 RAB40BQ12829 278 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 IRF3Q14653 427 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 EXOSC7Q15024 291 aaKnown RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 OR1Q1Q15612 314 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SNAPC1Q16533 368 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 TIGD6Q17RP2 521 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 C3orf38Q5JPI3 329 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 HLA-DQA1Q5Y7H0 255 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 ULK3Q6PHR2 472 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CCDC81Q6ZN84 652 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 TMPRSS11FQ6ZWK6 438 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 GID4Q8IVV7 300 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CCDC103Q8IW40 242 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SFTPA2Q8IWL1 248 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SLC25A45Q8N413 288 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 LSMEM1Q8N8F7 131 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM52Q8NDY8 209 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 PROKR2Q8NFJ6 384 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 B3GNT7Q8NFL0 401 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 OR2T33Q8NG76 320 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 OR4C6Q8NH72 309 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM163Q8TC26 289 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 S100ZQ8WXG8 99 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 PTCHD1Q96NR3 888 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 MND1Q9BWT6 205 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SLC19A3Q9BZV2 496 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 OR10A5Q9H207 317 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 FN3KQ9H479 309 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF304Q9HCX3 659 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 ISYNA1Q9NPH2 558 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SEMA4GQ9NTN9 838 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 TBC1D23Q9NUY8 699 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 UCKL1Q9NWZ5 548 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 H2AFY2Q9P0M6 372 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CBLCQ9ULV8 474 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 EXOSC1Q9Y3B2 195 aaKnown RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CLCA3PQ9Y6N3 262 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CACNA1EQ15878 2313 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 FAM86C2PA6NEL3 165 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 UNC119BA6NIH7 251 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 KLF4O43474 513 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SDC3O75056 442 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 DNAJB6O75190 326 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ENTPD6O75354 484 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 BCAS1O75363 584 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CLPXO76031 633 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 DCNP07585 359 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 HPGDP15428 266 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CD36P16671 472 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 GRK5P34947 590 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 PTGER1P34995 402 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 OMPP47874 163 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SLC6A8P48029 635 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CLK1P49759 484 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF136P52737 540 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CTBP2P56545 445 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ZXDAP98168 799 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 PSG6Q00889 435 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 PRKCDQ05655 676 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SIGLEC14Q08ET2 396 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SMN1Q16637 294 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF829Q3KNS6 432 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 AMZ1Q400G9 498 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ANKDD1AQ495B1 522 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 MINDY4Q4G0A6 757 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TTLL10Q6ZVT0 673 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 BMP8AQ7Z5Y6 402 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM151BQ8IW70 566 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 AMER2Q8N7J2 671 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TCEANCQ8N8B7 351 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 PLPP5Q8NEB5 264 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 C17orf47Q8NEP4 570 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 OR4D9Q8NGE8 314 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM239Q8WW34 195 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 BORCS5Q969J3 196 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 ZG16BQ96DA0 208 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CNPPD1Q9BV87 410 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TGIF2Q9GZN2 237 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SPRTNQ9H040 489 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 EXOSC3Q9NQT5 275 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 UBQLN4Q9NRR5 601 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 FGF21Q9NSA1 209 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 TVP23BQ9NYZ1 205 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 COPS7AQ9UBW8 275 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 SLC7A7Q9UM01 511 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 DIMT1Q9UNQ2 313 aaKnown RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 GPR55Q9Y2T6 319 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-206ENST00000493553 NINQ8N4C6 2090 aa9.24□□□□□ -0.93
PRPF3-206ENST00000493553 CABIN1Q9Y6J0 2220 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 IGKV3D-11A0A0A0MRZ8 115 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 A0A1W2PPW3 197 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 FRG2CA6NGY1 282 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 C17orf105B2RV13 164 aa9.23□□□□□ -0.93
PRPF3-206ENST00000493553 NPIPB9F8W1W9 429 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms