RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ARSKQ6UWY0 536 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 CLEC18BQ6UXF7 455 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 CARM1Q86X55 608 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 RBM45Q8IUH3 476 aaKnown RBP15.63■□□□□ 0.09
LIME1-208ENST00000493265 EID3Q8N140 333 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 TMEM251Q8N6I4 163 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 FADS6Q8N9I5 356 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ZFP62Q8NB50 900 aaPredicted RBP15.63■□□□□ 0.09
LIME1-208ENST00000493265 CLEC18CQ8NCF0 446 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 FAM71CQ8NEG0 241 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 OR5W2Q8NH69 310 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ZNF563Q8TA94 476 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 TAAR6Q96RI8 345 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ARHGDIGQ99819 225 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ICAM5Q9UMF0 924 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 SLC9A8Q9Y2E8 581 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 NTNG1Q9Y2I2 539 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 CNTRLQ7Z7A1 2325 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 NBPF19A0A087WUL8 3843 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 USP9XQ93008 2570 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 ANKUB1A6NFN9 424 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 SHISA8B8ZZ34 492 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 FAM47E-STBD1D6RA91 191 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 SYT5O00445 386 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 TFECO14948 347 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 ADAM11O75078 769 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 CELA3AP09093 270 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 ZNF24P17028 368 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 HK1P19367 917 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 DPP4P27487 766 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 ZNF41P51814 821 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 FOXD4Q12950 439 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 CBFBQ13951 182 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 ELOAQ14241 798 aaKnown RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 TOMM34Q15785 309 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 IFI44LQ53G44 452 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 DEF8Q6ZN54 512 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 ZNF550Q7Z398 422 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 SLC22A16Q86VW1 577 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 LSRQ86X29 649 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 GRAMD2AQ8IUY3 354 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 ZNF440Q8IYI8 595 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 CADM2Q8N3J6 435 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 FAM26EQ8N5C1 309 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 CISD2Q8N5K1 135 aaKnown RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 Q8NA96 180 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 OR4D11Q8NGI4 311 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 GPR119Q8TDV5 335 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 PYURFQ96I23 114 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 DEFB127Q9H1M4 99 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 HHATLQ9HCP6 504 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 EXOSC3Q9NQT5 275 aaKnown RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 CTPS2Q9NRF8 586 aa15.62■□□□□ 0.09
LIME1-208ENST00000493265 RPH3AQ9Y2J0 694 aaPredicted RBP15.62■□□□□ 0.09
LIME1-208ENST00000493265 IGLV3-32A0A0A0MS00 114 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 TCRBV5S2A0A599 114 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 GLSO94925 669 aaPredicted RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 C8BP07358 591 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 PGCP20142 388 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 SLC6A8P48029 635 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 IDH2P48735 452 aaKnown RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 MLLT10P55197 1068 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 ALDH6A1Q02252 535 aaKnown RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 EPS8Q12929 822 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 QPRTQ15274 297 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 NRF1Q16656 503 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 MTX3Q5HYI7 312 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 POMZP3Q6PJE2 187 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 FAM180AQ6UWF9 173 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 YRDCQ86U90 279 aaKnown RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 RANBP3LQ86VV4 465 aaPredicted RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 OR6T1Q8NGN1 323 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 OR5M1Q8NGP8 315 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 OR14L1PQ8NHC6 308 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 RNF217Q8TC41 542 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 MIB2Q96AX9 1013 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 C1GALT1C1Q96EU7 318 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 SLC47A1Q96FL8 570 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 RSRC1Q96IZ7 334 aaKnown RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 ZNF703Q9H7S9 590 aaPredicted RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 OLAHQ9NV23 265 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 SPTAN1Q13813 2472 aaKnown RBP15.61■□□□□ 0.09
LIME1-208ENST00000493265 TEX15Q9BXT5 2789 aa15.61■□□□□ 0.09
LIME1-208ENST00000493265 CPSF4LA6NMK7 179 aaKnown RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 hCG_2039718K7EN88 272 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 UQCRBP14927 111 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 ACAA2P42765 397 aaKnown RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 YAP1P46937 504 aaKnown RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 ZNF136P52737 540 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 SUMO3P55854 103 aaPredicted RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 DSCR4P56555 118 aaPredicted RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 COPZ1P61923 177 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 KPNB1Q14974 876 aaKnown RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 NPTX1Q15818 432 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 PRR30Q53SZ7 412 aaPredicted RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 WIPI1Q5MNZ9 446 aaPredicted RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 RPUSD3Q6P087 351 aaKnown RBP15.6■□□□□ 0.09
LIME1-208ENST00000493265 OR52E4Q8NGH9 312 aa15.6■□□□□ 0.09
LIME1-208ENST00000493265 GEMIN6Q8WXD5 167 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms