RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 PANX1Q96RD7 426 aa16.9■□□□□ 0.3
SSC4D-202ENST00000492979 SLC35A5Q9BS91 424 aa16.9■□□□□ 0.3
SSC4D-202ENST00000492979 MKLN1Q9UL63 735 aa16.9■□□□□ 0.3
SSC4D-202ENST00000492979 WDR45Q9Y484 360 aa16.9■□□□□ 0.3
SSC4D-202ENST00000492979 TESMINQ9Y4I5 508 aa16.9■□□□□ 0.3
SSC4D-202ENST00000492979 NPIPA5A0A0B4J1W7 369 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 PRAMEF27A3QJZ7 478 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 SH3D21A4FU49 640 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 NPIPA7E9PJI5 369 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 NPIPA8P0DM63 369 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 SLC6A8P48029 635 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 CARD18P57730 90 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 RAC3P60763 192 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 FOXF1Q12946 379 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 RNPS1Q15287 305 aaKnown RBP16.89■□□□□ 0.29
SSC4D-202ENST00000492979 GPR68Q15743 365 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 SLC9B1Q4ZJI4 515 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 HBMQ6B0K9 141 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 CDC20BQ86Y33 519 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 CLEC4FQ8N1N0 589 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 ZNF619Q8N2I2 560 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 SLC43A2Q8N370 569 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 LINC01560Q8TB33 94 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 RNF128Q8TEB7 428 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 TMEM234Q8WY98 164 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 FOXC2Q99958 501 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 GPATCH1Q9BRR8 931 aaKnown RBP16.89■□□□□ 0.29
SSC4D-202ENST00000492979 MTHFD2LQ9H903 347 aaPredicted RBP16.89■□□□□ 0.29
SSC4D-202ENST00000492979 ACER3Q9NUN7 267 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 EMC9Q9Y3B6 208 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 GMEB1Q9Y692 573 aa16.89■□□□□ 0.29
SSC4D-202ENST00000492979 TEP1Q99973 2627 aaKnown RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 GOLGA8QA0A0J9YX86 632 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 GOLGA8OA6NCC3 632 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 GOLGA8NF8WBI6 632 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 FAAHO00519 579 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 UBDO15205 165 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 CXCL13O43927 109 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 SYNGR4O95473 234 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 KRT75O95678 551 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 CSTAP01040 98 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 HRGP04196 525 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 CD1EP15812 388 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 PGCP20142 388 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 CHI3L1P36222 383 aaPredicted RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 MAP2K6P52564 334 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 MVDP53602 400 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 KCNJ10P78508 379 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 SNTB1Q13884 538 aaKnown RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 QPRTQ15274 297 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 TOMM34Q15785 309 aaPredicted RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 MAPK14Q16539 360 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 CNEP1R1Q8N9A8 125 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 ZFP90Q8TF47 636 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 ZNF524Q96C55 264 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 SLC38A1Q9H2H9 487 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 PLEKHF2Q9H8W4 249 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 FANCFQ9NPI8 374 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 THUMPD1Q9NXG2 353 aaKnown RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 ST6GALNAC2Q9UJ37 374 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 PROCRQ9UNN8 238 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 USH1CQ9Y6N9 552 aa16.88■□□□□ 0.29
SSC4D-202ENST00000492979 MAP1AP78559 2803 aaPredicted RBP16.88■□□□□ 0.29
SSC4D-202ENST00000492979 C16orf97H3BN30 126 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 RFXANKO14593 260 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 TNFSF11O14788 317 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 GMFGO60234 142 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 NUDT14O95848 222 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 KITP10721 976 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 PPP3CBP16298 524 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 RPS4Y1P22090 263 aaKnown RBP16.87■□□□□ 0.29
SSC4D-202ENST00000492979 UGT2B10P36537 528 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 CLK1P49759 484 aaKnown RBP16.87■□□□□ 0.29
SSC4D-202ENST00000492979 FAM27E3Q08E93 113 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 ZNF239Q16600 458 aaKnown RBP16.87■□□□□ 0.29
SSC4D-202ENST00000492979 TNFAIP8L2Q6P589 184 aaPredicted RBP16.87■□□□□ 0.29
SSC4D-202ENST00000492979 ZNF610Q8N9Z0 462 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 SLC25A43Q8WUT9 341 aaPredicted RBP16.87■□□□□ 0.29
SSC4D-202ENST00000492979 RAB8BQ92930 207 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 ZG16BQ96DA0 208 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 OR52B2Q96RD2 323 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 PRRG4Q9BZD6 226 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 RMND5AQ9H871 391 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 COQ10BQ9H8M1 238 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 ITPR3Q14573 2671 aa16.87■□□□□ 0.29
SSC4D-202ENST00000492979 CENPVL1A0A0U1RR11 272 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 AGAP5A6NIR3 686 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 HMGB1P1B2RPK0 211 aaPredicted RBP16.86■□□□□ 0.29
SSC4D-202ENST00000492979 SMNDC1O75940 238 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSC4D-202ENST00000492979 H2AFXP16104 143 aaPredicted RBP16.86■□□□□ 0.29
SSC4D-202ENST00000492979 APOBEC1P41238 236 aaKnown RBP16.86■□□□□ 0.29
SSC4D-202ENST00000492979 CDKN2CP42773 168 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 SESN3P58005 492 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 ZSWIM7Q19AV6 140 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 C3orf33Q6P1S2 294 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 ZNF621Q6ZSS3 439 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 BEND4Q6ZU67 534 aa16.86■□□□□ 0.29
SSC4D-202ENST00000492979 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms