RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 EXOSC6Q5RKV6 272 aaKnown RBP9.71□□□□□ -0.86
SND1-215ENST00000492772 FAM166AQ6J272 317 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 ZNF544Q6NX49 715 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 C3orf33Q6P1S2 294 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 TIFABQ6ZNK6 161 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 GALNT5Q7Z7M9 940 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 ZNF100Q8IYN0 542 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 DEPDC4Q8N2C3 294 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 ZNF433Q8N7K0 673 aaPredicted RBP9.71□□□□□ -0.86
SND1-215ENST00000492772 CCDC126Q96EE4 140 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 EGLN2Q96KS0 407 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 STACQ99469 402 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 CCT7Q99832 543 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 HOXD1Q9GZZ0 328 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 REEP4Q9H6H4 257 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 DUSP22Q9NRW4 184 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 ACSS1Q9NUB1 689 aaPredicted RBP9.71□□□□□ -0.86
SND1-215ENST00000492772 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 ICAM5Q9UMF0 924 aa9.71□□□□□ -0.86
SND1-215ENST00000492772 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 SMAD9O15198 467 aaKnown RBP9.7□□□□□ -0.86
SND1-215ENST00000492772 SEC22BO75396 215 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 RAD51DO75771 328 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 GSTA1P08263 222 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 DDX5P17844 614 aaKnown RBP9.7□□□□□ -0.86
SND1-215ENST00000492772 CD40P25942 277 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CASQ1P31415 396 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 FABP6P51161 128 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 EFNA4P52798 201 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
SND1-215ENST00000492772 CHRNB3Q05901 458 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 SPOCK1Q08629 439 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 PDE7AQ13946 482 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 ZNF385BQ569K4 471 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 SLC25A53Q5H9E4 307 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CCNJQ5T5M9 372 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 ANKRD26P1Q6NSI1 321 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CBLN3Q6UW01 205 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CCNYL1Q8N7R7 359 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 TOR1AIP2Q8NFQ8 470 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 GPR119Q8TDV5 335 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 HTRA1Q92743 480 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CHMP6Q96FZ7 201 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 ZNF300Q96RE9 604 aaPredicted RBP9.7□□□□□ -0.86
SND1-215ENST00000492772 FMO2Q99518 471 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 GIN1Q9NXP7 522 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 CARD8Q9Y2G2 431 aa9.7□□□□□ -0.86
SND1-215ENST00000492772 A0A1W2PNR3 127 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CIB4A0PJX0 185 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 NPIPB8E9PQR5 432 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 GTPBP1O00178 669 aaKnown RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 NDUFS8O00217 210 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 ETV2O00321 342 aaPredicted RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 OIP5O43482 229 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 UROSP10746 265 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 EDNRAP25101 427 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 ZNF83P51522 516 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CSNK2A1P68400 391 aaPredicted RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 CBFBQ13951 182 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 SQLEQ14534 574 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 KIAA0040Q15053 153 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 TOMM34Q15785 309 aaPredicted RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 KLHL26Q53HC5 615 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FAM120AOSQ5T036 256 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 LIPNQ5VXI9 398 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FBXW9Q5XUX1 488 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 ABLIM2Q6H8Q1 611 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 LRIG3Q6UXM1 1119 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 B3GLCTQ6Y288 498 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FRMD7Q6ZUT3 714 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CNPY4Q8N129 248 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 UBE2J2Q8N2K1 259 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 TMCO5AQ8N6Q1 288 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 ARIH2OSQ8N7S6 290 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 OR52N5Q8NH56 324 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CDS1Q92903 461 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 MTERF3Q96E29 417 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FAM120BQ96EK7 910 aaKnown RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 OTUB1Q96FW1 271 aaPredicted RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 C16orf58Q96GQ5 468 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FCRL1Q96LA6 429 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 OR5B2Q96R09 309 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 PIMREGQ9BSJ6 248 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 INPP5KQ9BT40 448 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 PIGUQ9H490 435 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CHODLQ9H9P2 273 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 ZCCHC3Q9NUD5 404 aaKnown RBP9.69□□□□□ -0.86
SND1-215ENST00000492772 C1orf109Q9NX04 203 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 SH3BP4Q9P0V3 963 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 PYCARDQ9ULZ3 195 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 CCL27Q9Y4X3 112 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 SLC25A15Q9Y619 301 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 FKBP7Q9Y680 259 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 PMF1-BGLAPU3KQ54 211 aa9.69□□□□□ -0.86
SND1-215ENST00000492772 MALRD1Q5VYJ5 2156 aa9.68□□□□□ -0.86
SND1-215ENST00000492772 SVEP1Q4LDE5 3571 aa9.68□□□□□ -0.86
SND1-215ENST00000492772 IGKV3D-15A0A087WSY6 115 aa9.68□□□□□ -0.86
SND1-215ENST00000492772 LOC100289279A0A1B0GTE1 492 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms