RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CARD18	P57730	90 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	PROK1	P58294	105 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	IFT88	Q13099	833 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	CHIT1	Q13231	466 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	EFR3A	Q14156	821 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	TSN	Q15631	228 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	TBCC	Q15814	346 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF239	Q16600	458 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	NRN1L	Q496H8	165 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	GLYR1	Q49A26	553 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ELFN2	Q5R3F8	820 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	FOXB2	Q5VYV0	432 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	LIPJ	Q5W064	366 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	STEAP4	Q687X5	459 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	OR4C11	Q6IEV9	310 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	METTL2B	Q6P1Q9	378 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	LRRC70	Q7Z2Q7	622 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	GPR180	Q86V85	440 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	UBE2J2	Q8N2K1	259 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	RIBC1	Q8N443	379 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	OR7G1	Q8NGA0	311 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	LINC01006	Q8NI28	216 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	MUC7	Q8TAX7	377 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	FBXO30	Q8TB52	745 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ANKRD49	Q8WVL7	239 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	POP5	Q969H6	163 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF775	Q96BV0	537 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC35A4	Q96G79	324 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	B9D2	Q9BPU9	175 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	TMEM79	Q9BSE2	394 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	CD244	Q9BZW8	370 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	BRINP2	Q9C0B6	783 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	IQCG	Q9H095	443 aa	Known RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	CAB39L	Q9H9S4	337 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	SOX21	Q9Y651	276 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC13-219	ENST00000492602		U3KQK5	164 aa		4.63	□□□□□ -1.67
SEC13-219	ENST00000492602	STAB2	Q8WWQ8	2551 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MDFIC2	A0A1B0GVS7	189 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602		K7EPI3	171 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	KLF11	O14901	512 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TAPBP	O15533	448 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	UGDH	O60701	494 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SCEL	O95171	688 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TGFB1	P01137	390 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	INHBA	P08476	426 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ADRA2A	P08913	450 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ALOX5	P09917	674 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	EPOR	P19235	508 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TAC1	P20366	129 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	DRD5	P21918	477 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ACHE	P22303	614 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	PIK3R1	P27986	724 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TYK2	P29597	1187 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	EVI2B	P34910	448 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	GPC1	P35052	558 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MAGEA4	P43358	317 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	HSPA7	P48741	367 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ATP4B	P51164	291 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ALDH18A1	P54886	795 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TMEM33	P57088	247 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TAS2R39	P59534	338 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	RAC1	P63000	192 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	PSPH	P78330	225 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MRPS22	P82650	360 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MRPS25	P82663	173 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	FASTKD3	Q14CZ7	662 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	EXOSC7	Q15024	291 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	UAP1	Q16222	522 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	KLF17	Q5JT82	389 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.62	□□□□□ -1.67	3e-7	■□□□□ 9.8
SEC13-219	ENST00000492602	FCRLA	Q7L513	359 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SPATA21	Q7Z572	469 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	CREG2	Q8IUH2	290 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	WDFY1	Q8IWB7	410 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF100	Q8IYN0	542 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TEX9	Q8N6V9	391 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	UHMK1	Q8TAS1	419 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	DUSP19	Q8WTR2	217 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	JADE3	Q92613	823 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	EXT2	Q93063	718 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	CPNE4	Q96A23	557 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	EFHD2	Q96C19	240 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	RAB39B	Q96DA2	213 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MARS2	Q96GW9	593 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SERPINI1	Q99574	410 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	DOK1	Q99704	481 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	KCNS3	Q9BQ31	491 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	FAIM2	Q9BWQ8	316 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SRXN1	Q9BYN0	137 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ALG9	Q9H6U8	611 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	CXorf36	Q9H7Y0	433 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	HHATL	Q9HCP6	504 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	TIGAR	Q9NQ88	270 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	SDHAF3	Q9NRP4	125 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	LYAR	Q9NX58	379 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	NUDT4	Q9NZJ9	180 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	MTO1	Q9Y2Z2	717 aa	Known RBP	4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	PLLP	Q9Y342	182 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms