RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 FOXF1Q12946 379 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 MAD2L1Q13257 205 aaPredicted RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 NCMAPQ5T1S8 102 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 CCNJQ5T5M9 372 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 CXXC5Q7LFL8 322 aaKnown RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 SZRD1Q7Z422 152 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 COX18Q8N8Q8 333 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 SPATA3Q8NHX4 192 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 PIWIL2Q8TC59 973 aaKnown RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 ABHD3Q8WU67 409 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 CPNE4Q96A23 557 aaPredicted RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 PPP1R36Q96LQ0 422 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 TSSK3Q96PN8 268 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 TACO1Q9BSH4 297 aaKnown RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 C1orf50Q9BV19 199 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 HDHD5Q9BXW7 423 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 SRXN1Q9BYN0 137 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 AKTIPQ9H8T0 292 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 ASIC5Q9NY37 505 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 SH3BP4Q9P0V3 963 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 MARCOQ9UEW3 520 aaPredicted RBP17.71■□□□□ 0.43
NELFE-212ENST00000492539 RNF115Q9Y4L5 304 aa17.71■□□□□ 0.43
NELFE-212ENST00000492539 TRPC5OSA6NMA1 111 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 EFNA2O43921 213 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 DANCRP0C864 163 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 KITP10721 976 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 ADH6P28332 368 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 POU6F2P78424 691 aaPredicted RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 ZNF117Q03924 483 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 MLC1Q15049 377 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 RNPS1Q15287 305 aaKnown RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 ETFDHQ16134 617 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 CLEC12BQ2HXU8 276 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 TMEM201Q5SNT2 666 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 IL23RQ5VWK5 629 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 NUFIP2Q7Z417 695 aaKnown RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 MTERF4Q7Z6M4 381 aaKnown RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 TUSC5Q8IXB3 177 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 CLHC1Q8NHS4 586 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 CKAP2Q8WWK9 683 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 MTERF3Q96E29 417 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 FAM120BQ96EK7 910 aaKnown RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 OTUB1Q96FW1 271 aaPredicted RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 MAGEB18Q96M61 343 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 GP6Q9HCN6 339 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 SIRT3Q9NTG7 399 aaPredicted RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 NOP53Q9NZM5 478 aaKnown RBP17.7■□□□□ 0.42
NELFE-212ENST00000492539 KLHL13Q9P2N7 655 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 BAIAP2L1Q9UHR4 511 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 CADP27708 2225 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 CUBNO60494 3623 aa17.7■□□□□ 0.42
NELFE-212ENST00000492539 ABCA1O95477 2261 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 NUP214P35658 2090 aaPredicted RBP17.69■□□□□ 0.42
NELFE-212ENST00000492539 SOD3P08294 240 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 SFTPDP35247 375 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 TAB1Q15750 504 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 SFRP5Q5T4F7 317 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 ARFGAP2Q8N6H7 521 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 FBXW5Q969U6 566 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 STACQ99469 402 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 BTBD2Q9BX70 525 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 COQ10BQ9H8M1 238 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 TIGARQ9NQ88 270 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 DUSP22Q9NRW4 184 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 GIN1Q9NXP7 522 aa17.69■□□□□ 0.42
NELFE-212ENST00000492539 SDHDO14521 159 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 LBPP18428 481 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 EFNA1P20827 205 aaPredicted RBP17.68■□□□□ 0.42
NELFE-212ENST00000492539 TSC22D1Q15714 1073 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 CBLN3Q6UW01 205 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 SEZ6L2Q6UXD5 910 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 FBXO27Q8NI29 283 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 CDS1Q92903 461 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 TRMT61AQ96FX7 289 aaKnown RBP17.68■□□□□ 0.42
NELFE-212ENST00000492539 REXO5Q96IC2 774 aaKnown RBP17.68■□□□□ 0.42
NELFE-212ENST00000492539 PIGUQ9H490 435 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 ESRP2Q9H6T0 727 aaKnown RBP17.68■□□□□ 0.42
NELFE-212ENST00000492539 SLCO1B3Q9NPD5 702 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 ZCCHC3Q9NUD5 404 aaKnown RBP17.68■□□□□ 0.42
NELFE-212ENST00000492539 ICAM5Q9UMF0 924 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 SNX8Q9Y5X2 465 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 MXRA5Q9NR99 2828 aa17.68■□□□□ 0.42
NELFE-212ENST00000492539 GJE1A6NN92 205 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 RNF223E7ERA6 249 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 ZNF195O14628 629 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 OIP5O43482 229 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 NTN1O95631 604 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 HMGN2P05204 90 aaKnown RBP17.67■□□□□ 0.42
NELFE-212ENST00000492539 CD3EP07766 207 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 THBS1P07996 1170 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 G6PDP11413 515 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 IL32P24001 234 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 HPCAL1P37235 193 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 RPL3P39023 403 aaKnown RBP17.67■□□□□ 0.42
NELFE-212ENST00000492539 P2RX1P51575 399 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 SUMO3P55854 103 aaPredicted RBP17.67■□□□□ 0.42
NELFE-212ENST00000492539 DMTNQ08495 405 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 VEZF1Q14119 521 aa17.67■□□□□ 0.42
NELFE-212ENST00000492539 LASP1Q14847 261 aaKnown RBP17.67■□□□□ 0.42
NELFE-212ENST00000492539 PTGR1Q14914 329 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms