RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	LIPK	Q5VXJ0	399 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TRIQK	Q629K1	86 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	STEAP3	Q658P3	488 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	WBP2NL	Q6ICG8	309 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF322	Q6U7Q0	402 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FAM131A	Q6UXB0	335 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF836	Q6ZNA1	936 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	C11orf74	Q86VG3	221 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	RBM45	Q8IUH3	476 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PLXDC1	Q8IUK5	500 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	MISP	Q8IVT2	679 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	AMER3	Q8N944	861 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	C19orf47	Q8N9M1	422 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	OR4D11	Q8NGI4	311 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	NEIL3	Q8TAT5	605 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FANK1	Q8TC84	345 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	LIPH	Q8WWY8	451 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	RPL3L	Q92901	407 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	DAZL	Q92904	295 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FGF11	Q92914	225 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ITFG2	Q969R8	447 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	FAM46A	Q96IP4	442 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF285	Q96NJ3	590 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SNX18	Q96RF0	628 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	UBL7	Q96S82	380 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TEAD3	Q99594	435 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SLC38A3	Q99624	504 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TMEM43	Q9BTV4	400 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF426	Q9BUY5	554 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	IFT27	Q9BW83	186 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	KLHL25	Q9H0H3	589 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SLITRK2	Q9H156	845 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	OR52D1	Q9H346	318 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ADAP2	Q9NPF8	381 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PRTFDC1	Q9NRG1	225 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SNTG1	Q9NSN8	517 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	SEMA4G	Q9NTN9	838 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	WSB2	Q9NYS7	404 aa	Predicted RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	MAT2B	Q9NZL9	334 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	ABRACL	Q9P1F3	81 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	OR10H1	Q9Y4A9	318 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	PLEKHM1	Q9Y4G2	1056 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	CSNK1G3	Q9Y6M4	447 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833	TCF20	Q9UGU0	1960 aa	Known RBP	5.87	□□□□□ -1.47
FN1-223	ENST00000490833	LRRK1	Q38SD2	2015 aa		5.87	□□□□□ -1.47
FN1-223	ENST00000490833		A0A0B4J2E0	115 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833		A0A1B0GX12	115 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833		A0A1W2PQL4	384 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	TMEM150C	B9EJG8	249 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	SCD	O00767	359 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	BHLHE40	O14503	412 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	OIP5	O43482	229 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ORC5	O43913	435 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	FOXD2	O60548	495 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	EIF4E2	O60573	245 aa	Known RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CTSV	O60911	334 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	PTP4A3	O75365	173 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	HLA-DQB1	P01920	261 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	C1QC	P02747	245 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	HIST1H2AB	P04908	130 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	PROS1	P07225	676 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	NGFR	P08138	427 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	HBQ1	P09105	142 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	SLC2A2	P11168	524 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	PRG2	P13727	222 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	NME1	P15531	152 aa	Known RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	GNS	P15586	552 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CEL	P19835	753 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	C4BPB	P20851	252 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	S100A1	P23297	94 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	AK4	P27144	223 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	HLA-DMA	P28067	261 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CD38	P28907	300 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ETV5	P41161	510 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	PPIC	P45877	212 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	HTR3A	P46098	478 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	MAP2K3	P46734	347 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CAPZB	P47756	277 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	SOX9	P48436	509 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ARL4D	P49703	201 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ETV1	P50549	477 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ZNF136	P52737	540 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	MLLT10	P55197	1068 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	RAG2	P55895	527 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	VSX2	P58304	361 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	AP3S2	P59780	193 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	SIM1	P81133	766 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	MRPS10	P82664	201 aa	Known RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	RPL6	Q02878	288 aa	Known RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	FUT7	Q11130	342 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CBX3	Q13185	183 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	TDG	Q13569	410 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	GGTLC2	Q14390	218 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	FGFBP1	Q14512	234 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	MFSD13A	Q14CX5	517 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ANGPT1	Q15389	498 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	CLPP	Q16740	277 aa	Predicted RBP	5.86	□□□□□ -1.47
FN1-223	ENST00000490833	ALG10B	Q5I7T1	473 aa		5.86	□□□□□ -1.47
FN1-223	ENST00000490833	WDR45B	Q5MNZ6	344 aa		5.86	□□□□□ -1.47

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