RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PSMA8Q8TAA3 256 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PPP1R14CQ8TAE6 165 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PHOSPHO1Q8TCT1 267 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ADAMTS15Q8TE58 950 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ZG16BQ96DA0 208 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 RNF145Q96MT1 663 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 MS4A4EQ96PG1 132 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SDF2Q99470 211 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PAIP2Q9BPZ3 127 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PIGQQ9BRB3 760 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SFXN3Q9BWM7 321 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 BTBD2Q9BX70 525 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 ACTRT3Q9BYD9 372 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 NUF2Q9BZD4 464 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 PTGES2Q9H7Z7 377 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 RNF122Q9H9V4 155 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 KLHL28Q9NXS3 571 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 FOXD3Q9UJU5 478 aaPredicted RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 MRTO4Q9UKD2 239 aaKnown RBP6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 CARD8Q9Y2G2 431 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 AP4B1Q9Y6B7 739 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 FREM1Q5H8C1 2179 aa6.55□□□□□ -1.36
PRPF4B-208ENST00000490653 SH3D21A4FU49 640 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 TTC36A6NLP5 189 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 NPIPB9F8W1W9 429 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ZNF195O14628 629 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 EREGO14944 169 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ATE1O95260 518 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ALDOCP09972 364 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 OR12D1P0DN82 309 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 CD1EP15812 388 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 MATN1P21941 496 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 LOXP28300 417 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 MAPK1P28482 360 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 CCKARP32238 428 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 SFTPDP35247 375 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 CPOXP36551 454 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 SERPINB5P36952 375 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 HPCAL1P37235 193 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 CD79BP40259 229 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 EIF1AXP47813 144 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 CPA2P48052 419 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ATP12AP54707 1039 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 UFM1P61960 85 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 PSPHP78330 225 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 BST1Q10588 318 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 FOXF1Q12946 379 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 STX3Q13277 289 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 GUSBP1Q15486 140 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 TSC22D1Q15714 1073 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 MAPK14Q16539 360 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 SGCBQ16585 318 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 SPDYE7PQ495Y7 208 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 DCST2Q5T1A1 773 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ZCCHC12Q6PEW1 402 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 Q71RC1 249 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 NUFIP2Q7Z417 695 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 KIF18BQ86Y91 864 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 GTPBP8Q8N3Z3 284 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 METTL25Q8N6Q8 603 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 GOT1L1Q8NHS2 421 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 FBXO27Q8NI29 283 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 MGARPQ8TDB4 240 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 GPR119Q8TDV5 335 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 OSTF1Q92882 214 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 RAB8BQ92930 207 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 DNAJA3Q96EY1 480 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 ZC3HAV1LQ96H79 300 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 STACQ99469 402 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 FOXC2Q99958 501 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 INPP5KQ9BT40 448 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 SRXN1Q9BYN0 137 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 QRSL1Q9H0R6 528 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 PIGMQ9H3S5 423 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 WDR55Q9H6Y2 383 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 DUSP22Q9NRW4 184 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 PACSIN3Q9UKS6 424 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 EIF3LQ9Y262 564 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 RAP2CQ9Y3L5 183 aa6.54□□□□□ -1.36
PRPF4B-208ENST00000490653 IGHV3-15A0A0B4J1V0 119 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 GOLGA8QA0A0J9YX86 632 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 A0A1W2PQD3 144 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 GOLGA8OA6NCC3 632 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 CLDN24A6NM45 220 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 DEFB108AA8MXU0 73 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 GOLGA8NF8WBI6 632 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 SCDO00767 359 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 SDHDO14521 159 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 BIRC5O15392 142 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 PLAUP00749 431 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 THBDP07204 575 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 NGFRP08138 427 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 KITP10721 976 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 CD53P19397 219 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 PRPS1L1P21108 318 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 EDNRAP25101 427 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 SOAT1P35610 550 aa6.53□□□□□ -1.36
PRPF4B-208ENST00000490653 CDKN2CP42773 168 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms