RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ANKZF1Q9H8Y5 726 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 CISD1Q9NZ45 108 aaKnown RBP14.06□□□□□ -0.16
PLOD3-216ENST00000489927 KLHL9Q9P2J3 617 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 KCNE3Q9Y6H6 103 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 CR1P17927 2039 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 A0A1W2PNR3 127 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 RNF212BA8MTL3 300 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 C9JVG2 144 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 H3BNH8 94 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 GTPBP1O00178 669 aaKnown RBP14.05□□□□□ -0.16
PLOD3-216ENST00000489927 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
PLOD3-216ENST00000489927 CHEK2O96017 543 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 FESP07332 822 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 LAMP1P11279 417 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 SLC7A1P30825 629 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 HPCAL1P37235 193 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 OR3A2P47893 321 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 C21orf58P58505 322 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 RAC3P60763 192 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 SELENBP1Q13228 472 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 TP53BP2Q13625 1128 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 PPA1Q15181 289 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 HIPK1Q86Z02 1210 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 ADAMTS15Q8TE58 950 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF775Q96BV0 537 aaPredicted RBP14.05□□□□□ -0.16
PLOD3-216ENST00000489927 HS6ST2Q96MM7 605 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 GATA5Q9BWX5 397 aaPredicted RBP14.05□□□□□ -0.16
PLOD3-216ENST00000489927 ACTRT3Q9BYD9 372 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 ALG2Q9H553 416 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 ATP6V1HQ9UI12 483 aa14.05□□□□□ -0.16
PLOD3-216ENST00000489927 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 NPIPB9F8W1W9 429 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 COPEO14579 308 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 SMAD9O15198 467 aaKnown RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 SHBGP04278 402 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 PTNP21246 168 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 CCT3P49368 545 aaKnown RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 ATP12AP54707 1039 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 RASGEF1BQ0VAM2 473 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 PCLAFQ15004 111 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 QPRTQ15274 297 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 SLC25A53Q5H9E4 307 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 PODNL1Q6PEZ8 512 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 DTX2Q86UW9 622 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 PHC2Q8IXK0 858 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 DDIASQ8IXT1 998 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 TMCO5AQ8N6Q1 288 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF614Q8N883 585 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 RFWD2Q8NHY2 731 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 PSMA8Q8TAA3 256 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF300Q96RE9 604 aaPredicted RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 GRIP2Q9C0E4 1043 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 L2HGDHQ9H9P8 463 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 BARX1Q9HBU1 254 aaPredicted RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 FAIMQ9NVQ4 179 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 GPATCH2Q9NW75 528 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 NPAP1Q9NZP6 1156 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 FAF1Q9UNN5 650 aaPredicted RBP14.04□□□□□ -0.16
PLOD3-216ENST00000489927 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
PLOD3-216ENST00000489927 FREM1Q5H8C1 2179 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 ETV2O00321 342 aaPredicted RBP14.03□□□□□ -0.16
PLOD3-216ENST00000489927 ABCD4O14678 606 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 PIP5K1BO14986 540 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 SSX4O60224 188 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 GPRIN2O60269 458 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 CYTIPO60759 359 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 H6PDO95479 791 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 IFNA2P01563 188 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 CHRNGP07510 517 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
PLOD3-216ENST00000489927 KRT4P19013 534 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 IGHV1-2P23083 117 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 CCR4P51679 360 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 CDH11P55287 796 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 PTGR1Q14914 329 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 UGT3A2Q3SY77 523 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 SPDYE7PQ495Y7 208 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 GSPT2Q8IYD1 628 aaKnown RBP14.03□□□□□ -0.16
PLOD3-216ENST00000489927 OR56A1Q8NGH5 318 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 OR5W2Q8NH69 310 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 OR5P2Q8WZ92 322 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF75CPQ92670 426 aaPredicted RBP14.03□□□□□ -0.16
PLOD3-216ENST00000489927 MUCL1Q96DR8 90 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 OR5B2Q96R09 309 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 B3GALT5Q9Y2C3 310 aa14.03□□□□□ -0.16
PLOD3-216ENST00000489927 ABCA1O95477 2261 aa14.02□□□□□ -0.16
PLOD3-216ENST00000489927 IGHV4-30-2A0A087WSY4 118 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 SMIM23A6NLE4 172 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 A8MV72 311 aaPredicted RBP14.02□□□□□ -0.17
PLOD3-216ENST00000489927 ESPNB1AK53 854 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 TMEM114B3SHH9 223 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 ZNF264O43296 627 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 TRIM13O60858 407 aa14.02□□□□□ -0.17
PLOD3-216ENST00000489927 C6orf47O95873 294 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms